Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ANKRD20A6P-201ENST00000618763 204 ntBASIC15□□□□□ -0.01
HIST1H1AQ02539 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HIST1H1AQ02539 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HIST1H1AQ02539 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H1AQ02539 H19-201ENST00000411754 1788 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H1AQ02539 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
HIST1H1AQ02539 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HIST1H1AQ02539 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H1AQ02539 AP000974.1-201ENST00000623909 2387 ntBASIC14.99□□□□□ -0.01
HIST1H1AQ02539 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 BX119927.1-201ENST00000636596 1552 ntBASIC14.99□□□□□ -0.01
HIST1H1AQ02539 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 DUX4L16-201ENST00000555130 1264 ntBASIC14.99□□□□□ -0.01
HIST1H1AQ02539 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIST1H1AQ02539 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.98□□□□□ -0.01
HIST1H1AQ02539 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 CYP2T1P-201ENST00000432607 1285 ntBASIC14.98□□□□□ -0.01
HIST1H1AQ02539 AL162430.1-201ENST00000480705 870 ntBASIC14.98□□□□□ -0.01
HIST1H1AQ02539 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 AC068338.2-201ENST00000563278 1430 ntBASIC14.98□□□□□ -0.01
HIST1H1AQ02539 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HIST1H1AQ02539 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 AC007322.1-201ENST00000426983 750 ntBASIC14.97□□□□□ -0.01
HIST1H1AQ02539 AC006015.1-201ENST00000429970 570 ntBASIC14.97□□□□□ -0.01
HIST1H1AQ02539 CNN2P6-201ENST00000439038 900 ntBASIC14.97□□□□□ -0.01
HIST1H1AQ02539 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HIST1H1AQ02539 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms