Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK3Q00526 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK3Q00526 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK3Q00526 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.35■□□□□ 0.69
CDK3Q00526 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDK3Q00526 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.35■□□□□ 0.69
CDK3Q00526 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CDK3Q00526 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDK3Q00526 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK3Q00526 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK3Q00526 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.35■□□□□ 0.69
CDK3Q00526 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK3Q00526 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK3Q00526 CR392000.1-201ENST00000624770 1228 ntBASIC19.35■□□□□ 0.69
CDK3Q00526 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDK3Q00526 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.35■□□□□ 0.69
CDK3Q00526 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.35■□□□□ 0.69
CDK3Q00526 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDK3Q00526 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.35■□□□□ 0.69
CDK3Q00526 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 KRT16P1-201ENST00000399124 1418 ntBASIC19.34■□□□□ 0.69
CDK3Q00526 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.34■□□□□ 0.69
CDK3Q00526 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.34■□□□□ 0.69
CDK3Q00526 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDK3Q00526 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.34■□□□□ 0.69
CDK3Q00526 AL355355.2-201ENST00000442321 338 ntBASIC19.34■□□□□ 0.69
CDK3Q00526 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.34■□□□□ 0.69
CDK3Q00526 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK3Q00526 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDK3Q00526 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDK3Q00526 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDK3Q00526 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDK3Q00526 AC112907.3-201ENST00000577781 2400 ntBASIC19.33■□□□□ 0.69
CDK3Q00526 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDK3Q00526 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDK3Q00526 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDK3Q00526 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CDK3Q00526 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.33■□□□□ 0.68
CDK3Q00526 AP003071.4-201ENST00000562276 1284 ntBASIC19.33■□□□□ 0.68
CDK3Q00526 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.33■□□□□ 0.68
CDK3Q00526 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK3Q00526 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.33■□□□□ 0.68
CDK3Q00526 AL445675.2-201ENST00000620291 557 ntBASIC19.33■□□□□ 0.68
CDK3Q00526 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK3Q00526 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK3Q00526 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK3Q00526 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDK3Q00526 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.33■□□□□ 0.68
CDK3Q00526 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CDK3Q00526 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.33■□□□□ 0.68
CDK3Q00526 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.33■□□□□ 0.68
CDK3Q00526 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK3Q00526 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDK3Q00526 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK3Q00526 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK3Q00526 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK3Q00526 NUDT16P1-203ENST00000513809 620 ntBASIC19.32■□□□□ 0.68
CDK3Q00526 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.32■□□□□ 0.68
CDK3Q00526 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK3Q00526 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK3Q00526 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK3Q00526 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK3Q00526 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.32■□□□□ 0.68
CDK3Q00526 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK3Q00526 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK3Q00526 KRT8P8-201ENST00000434750 1448 ntBASIC19.32■□□□□ 0.68
CDK3Q00526 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK3Q00526 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK3Q00526 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK3Q00526 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK3Q00526 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK3Q00526 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CDK3Q00526 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK3Q00526 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK3Q00526 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDK3Q00526 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK3Q00526 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.31■□□□□ 0.68
CDK3Q00526 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK3Q00526 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK3Q00526 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK3Q00526 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK3Q00526 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CDK3Q00526 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.31■□□□□ 0.68
CDK3Q00526 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK3Q00526 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK3Q00526 AL355075.4-201ENST00000554988 638 ntBASIC19.31■□□□□ 0.68
CDK3Q00526 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.31■□□□□ 0.68
CDK3Q00526 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.31■□□□□ 0.68
CDK3Q00526 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK3Q00526 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms