Protein–RNA interactions for Protein: P82673

MRPS35, 28S ribosomal protein S35, mitochondrial, humanhuman

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35P82673 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
MRPS35P82673 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.22■□□□□ 0.67
MRPS35P82673 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
MRPS35P82673 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 AC093484.2-201ENST00000580996 2166 ntBASIC19.22■□□□□ 0.67
MRPS35P82673 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 AC004911.1-201ENST00000416316 871 ntBASIC19.22■□□□□ 0.67
MRPS35P82673 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.22■□□□□ 0.67
MRPS35P82673 CNN2P6-201ENST00000439038 900 ntBASIC19.22■□□□□ 0.67
MRPS35P82673 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.22■□□□□ 0.67
MRPS35P82673 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.22■□□□□ 0.67
MRPS35P82673 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.22■□□□□ 0.67
MRPS35P82673 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MRPS35P82673 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.22■□□□□ 0.67
MRPS35P82673 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.22■□□□□ 0.67
MRPS35P82673 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.22■□□□□ 0.67
MRPS35P82673 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.22■□□□□ 0.67
MRPS35P82673 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
MRPS35P82673 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPS35P82673 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
MRPS35P82673 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MRPS35P82673 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.21■□□□□ 0.67
MRPS35P82673 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.21■□□□□ 0.67
MRPS35P82673 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MRPS35P82673 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.21■□□□□ 0.67
MRPS35P82673 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.21■□□□□ 0.67
MRPS35P82673 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.21■□□□□ 0.67
MRPS35P82673 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MRPS35P82673 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.21■□□□□ 0.67
MRPS35P82673 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.21■□□□□ 0.67
MRPS35P82673 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MRPS35P82673 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MRPS35P82673 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.21■□□□□ 0.67
MRPS35P82673 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
MRPS35P82673 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPS35P82673 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
MRPS35P82673 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
MRPS35P82673 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.2■□□□□ 0.66
MRPS35P82673 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.2■□□□□ 0.66
MRPS35P82673 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.2■□□□□ 0.66
MRPS35P82673 CDV3P1-201ENST00000471403 739 ntBASIC19.2■□□□□ 0.66
MRPS35P82673 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
MRPS35P82673 AL591742.1-201ENST00000604433 565 ntBASIC19.2■□□□□ 0.66
MRPS35P82673 AL137784.2-201ENST00000607332 1000 ntBASIC19.2■□□□□ 0.66
MRPS35P82673 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.2■□□□□ 0.66
MRPS35P82673 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPS35P82673 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.19■□□□□ 0.66
MRPS35P82673 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPS35P82673 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
MRPS35P82673 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.19■□□□□ 0.66
MRPS35P82673 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPS35P82673 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRPS35P82673 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPS35P82673 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.19■□□□□ 0.66
MRPS35P82673 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRPS35P82673 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.19■□□□□ 0.66
MRPS35P82673 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPS35P82673 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPS35P82673 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPS35P82673 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MRPS35P82673 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms