Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SRPXP78539 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SRPXP78539 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SRPXP78539 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.17■□□□□ 0.18
SRPXP78539 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SRPXP78539 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 PTBP1P-201ENST00000554374 1601 ntBASIC16.17■□□□□ 0.18
SRPXP78539 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
SRPXP78539 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SRPXP78539 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.17■□□□□ 0.18
SRPXP78539 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SRPXP78539 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.17■□□□□ 0.18
SRPXP78539 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 NEFHP1-201ENST00000412845 2629 ntBASIC16.17■□□□□ 0.18
SRPXP78539 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
SRPXP78539 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SRPXP78539 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRPXP78539 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.16■□□□□ 0.18
SRPXP78539 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.16■□□□□ 0.18
SRPXP78539 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SRPXP78539 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SRPXP78539 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.16■□□□□ 0.18
SRPXP78539 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.16■□□□□ 0.18
SRPXP78539 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.16■□□□□ 0.18
SRPXP78539 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.16■□□□□ 0.18
SRPXP78539 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.16■□□□□ 0.18
SRPXP78539 MIR6084-201ENST00000622012 110 ntBASIC16.16■□□□□ 0.18
SRPXP78539 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SRPXP78539 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SRPXP78539 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRPXP78539 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SRPXP78539 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.16■□□□□ 0.18
SRPXP78539 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SRPXP78539 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SRPXP78539 LINC02228-203ENST00000641970 1355 ntBASIC16.15■□□□□ 0.18
SRPXP78539 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SRPXP78539 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.15■□□□□ 0.18
SRPXP78539 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.15■□□□□ 0.18
SRPXP78539 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SRPXP78539 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.15■□□□□ 0.18
SRPXP78539 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.15■□□□□ 0.18
SRPXP78539 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.15■□□□□ 0.18
SRPXP78539 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.15■□□□□ 0.18
SRPXP78539 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SRPXP78539 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SRPXP78539 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRPXP78539 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SRPXP78539 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms