Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2NP61088 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2NP61088 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2NP61088 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2NP61088 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2NP61088 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
UBE2NP61088 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
UBE2NP61088 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2NP61088 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.26■□□□□ 0.35
UBE2NP61088 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2NP61088 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2NP61088 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2NP61088 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.25■□□□□ 0.35
UBE2NP61088 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2NP61088 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.25■□□□□ 0.35
UBE2NP61088 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.25■□□□□ 0.35
UBE2NP61088 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2NP61088 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
UBE2NP61088 AP006294.2-201ENST00000641667 209 ntBASIC17.25■□□□□ 0.35
UBE2NP61088 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
UBE2NP61088 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
UBE2NP61088 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBE2NP61088 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2NP61088 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 RNF165-205ENST00000588679 2904 ntBASIC17.24■□□□□ 0.35
UBE2NP61088 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2NP61088 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE2NP61088 TFP1-202ENST00000475455 1573 ntBASIC17.24■□□□□ 0.35
UBE2NP61088 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
UBE2NP61088 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UBE2NP61088 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 AC133681.1-201ENST00000465482 601 ntBASIC17.24■□□□□ 0.35
UBE2NP61088 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.24■□□□□ 0.35
UBE2NP61088 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.24■□□□□ 0.35
UBE2NP61088 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE2NP61088 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2NP61088 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2NP61088 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2NP61088 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
UBE2NP61088 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE2NP61088 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE2NP61088 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2NP61088 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
UBE2NP61088 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE2NP61088 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UBE2NP61088 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
UBE2NP61088 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UBE2NP61088 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE2NP61088 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE2NP61088 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
UBE2NP61088 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
UBE2NP61088 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE2NP61088 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE2NP61088 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE2NP61088 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE2NP61088 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE2NP61088 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE2NP61088 AL691432.2-201ENST00000607222 2038 ntBASIC17.23■□□□□ 0.35
UBE2NP61088 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UBE2NP61088 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2NP61088 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE2NP61088 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
UBE2NP61088 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms