Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
DEFA3P59666 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.24■□□□□ 0.35
DEFA3P59666 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA3P59666 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA3P59666 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA3P59666 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
DEFA3P59666 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.23■□□□□ 0.35
DEFA3P59666 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.23■□□□□ 0.35
DEFA3P59666 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DEFA3P59666 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.23■□□□□ 0.35
DEFA3P59666 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.23■□□□□ 0.35
DEFA3P59666 AC241377.3-202ENST00000626088 1088 ntBASIC17.23■□□□□ 0.35
DEFA3P59666 AC241585.3-202ENST00000628937 1088 ntBASIC17.23■□□□□ 0.35
DEFA3P59666 AC245100.8-202ENST00000629247 1058 ntBASIC17.23■□□□□ 0.35
DEFA3P59666 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
DEFA3P59666 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.23■□□□□ 0.35
DEFA3P59666 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 DPP3P2-201ENST00000416030 1696 ntBASIC17.23■□□□□ 0.35
DEFA3P59666 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
DEFA3P59666 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA3P59666 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA3P59666 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
DEFA3P59666 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DEFA3P59666 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA3P59666 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA3P59666 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA3P59666 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.22■□□□□ 0.35
DEFA3P59666 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA3P59666 OR2I1P-207ENST00000453522 948 ntBASIC17.22■□□□□ 0.35
DEFA3P59666 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
DEFA3P59666 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.22■□□□□ 0.35
DEFA3P59666 MIR2861-201ENST00000636310 90 ntBASIC17.22■□□□□ 0.35
DEFA3P59666 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA3P59666 AC106820.2-201ENST00000563775 3264 ntBASIC17.22■□□□□ 0.35
DEFA3P59666 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA3P59666 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
DEFA3P59666 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.22■□□□□ 0.35
DEFA3P59666 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA3P59666 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
DEFA3P59666 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.21■□□□□ 0.35
DEFA3P59666 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DEFA3P59666 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.21■□□□□ 0.35
DEFA3P59666 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.21■□□□□ 0.35
DEFA3P59666 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.21■□□□□ 0.35
DEFA3P59666 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.21■□□□□ 0.35
DEFA3P59666 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.21■□□□□ 0.35
DEFA3P59666 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.21■□□□□ 0.35
DEFA3P59666 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
DEFA3P59666 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA3P59666 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DEFA3P59666 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DEFA3P59666 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DEFA3P59666 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
DEFA3P59666 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA3P59666 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DEFA3P59666 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA3P59666 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA3P59666 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.2■□□□□ 0.34
DEFA3P59666 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA3P59666 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.2■□□□□ 0.34
DEFA3P59666 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA3P59666 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DEFA3P59666 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA3P59666 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA3P59666 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.2■□□□□ 0.34
DEFA3P59666 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA3P59666 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DEFA3P59666 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms