Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB38P57729 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB38P57729 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB38P57729 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB38P57729 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.48■□□□□ 0.55
RAB38P57729 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.48■□□□□ 0.55
RAB38P57729 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RAB38P57729 KRT16P5-201ENST00000455284 522 ntBASIC18.48■□□□□ 0.55
RAB38P57729 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.48■□□□□ 0.55
RAB38P57729 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAB38P57729 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB38P57729 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RAB38P57729 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RAB38P57729 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RAB38P57729 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
RAB38P57729 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB38P57729 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB38P57729 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAB38P57729 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB38P57729 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB38P57729 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB38P57729 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB38P57729 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB38P57729 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
RAB38P57729 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB38P57729 AL158047.1-201ENST00000445918 881 ntBASIC18.47■□□□□ 0.55
RAB38P57729 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB38P57729 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.47■□□□□ 0.55
RAB38P57729 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RAB38P57729 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.47■□□□□ 0.55
RAB38P57729 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.47■□□□□ 0.55
RAB38P57729 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.47■□□□□ 0.55
RAB38P57729 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB38P57729 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB38P57729 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB38P57729 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB38P57729 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB38P57729 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB38P57729 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RAB38P57729 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.46■□□□□ 0.55
RAB38P57729 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB38P57729 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB38P57729 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB38P57729 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
RAB38P57729 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RAB38P57729 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RAB38P57729 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB38P57729 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB38P57729 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB38P57729 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB38P57729 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.46■□□□□ 0.55
RAB38P57729 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB38P57729 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB38P57729 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB38P57729 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB38P57729 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
RAB38P57729 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB38P57729 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
RAB38P57729 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RAB38P57729 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RAB38P57729 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAB38P57729 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.45■□□□□ 0.54
RAB38P57729 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB38P57729 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB38P57729 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB38P57729 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAB38P57729 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.45■□□□□ 0.54
RAB38P57729 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.45■□□□□ 0.54
RAB38P57729 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RAB38P57729 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RAB38P57729 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.45■□□□□ 0.54
RAB38P57729 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RAB38P57729 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB38P57729 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RAB38P57729 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB38P57729 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB38P57729 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.45■□□□□ 0.54
RAB38P57729 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAB38P57729 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
RAB38P57729 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAB38P57729 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB38P57729 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAB38P57729 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAB38P57729 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.44■□□□□ 0.54
RAB38P57729 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB38P57729 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB38P57729 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.44■□□□□ 0.54
RAB38P57729 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms