Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.13■□□□□ 0.49
PER3P56645 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.13■□□□□ 0.49
PER3P56645 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PER3P56645 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.13■□□□□ 0.49
PER3P56645 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PER3P56645 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PER3P56645 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.13■□□□□ 0.49
PER3P56645 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PER3P56645 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.13■□□□□ 0.49
PER3P56645 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PER3P56645 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PER3P56645 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.13■□□□□ 0.49
PER3P56645 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PER3P56645 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PER3P56645 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PER3P56645 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PER3P56645 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
PER3P56645 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PER3P56645 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
PER3P56645 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PER3P56645 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PER3P56645 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PER3P56645 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PER3P56645 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.12■□□□□ 0.49
PER3P56645 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PER3P56645 AC138932.1-201ENST00000534164 6830 ntBASIC18.12■□□□□ 0.49
PER3P56645 AC011484.1-201ENST00000377652 1995 ntBASIC18.12■□□□□ 0.49
PER3P56645 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.12■□□□□ 0.49
PER3P56645 MMP23A-201ENST00000234610 1017 ntBASIC18.12■□□□□ 0.49
PER3P56645 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PER3P56645 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PER3P56645 AL353807.1-201ENST00000427475 662 ntBASIC18.12■□□□□ 0.49
PER3P56645 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PER3P56645 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PER3P56645 AL049597.2-201ENST00000565575 961 ntBASIC18.12■□□□□ 0.49
PER3P56645 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PER3P56645 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
PER3P56645 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PER3P56645 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.11■□□□□ 0.49
PER3P56645 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.11■□□□□ 0.49
PER3P56645 KRT18P35-201ENST00000510488 1269 ntBASIC18.11■□□□□ 0.49
PER3P56645 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PER3P56645 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.11■□□□□ 0.49
PER3P56645 AC006557.6-201ENST00000623071 864 ntBASIC18.11■□□□□ 0.49
PER3P56645 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.11■□□□□ 0.49
PER3P56645 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.11■□□□□ 0.49
PER3P56645 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.11■□□□□ 0.49
PER3P56645 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PER3P56645 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PER3P56645 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 AFG3L1P-217ENST00000557444 2447 ntBASIC18.1■□□□□ 0.49
PER3P56645 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.1■□□□□ 0.49
PER3P56645 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PER3P56645 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.1■□□□□ 0.49
PER3P56645 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PER3P56645 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PER3P56645 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 TSPY15P-201ENST00000457163 923 ntBASIC18.1■□□□□ 0.49
PER3P56645 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.1■□□□□ 0.49
PER3P56645 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.1■□□□□ 0.49
PER3P56645 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.1■□□□□ 0.49
PER3P56645 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.1■□□□□ 0.49
PER3P56645 AP003071.4-201ENST00000562276 1284 ntBASIC18.1■□□□□ 0.49
PER3P56645 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.1■□□□□ 0.49
PER3P56645 RN7SL850P-201ENST00000579959 291 ntBASIC18.1■□□□□ 0.49
PER3P56645 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PER3P56645 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PER3P56645 AC026471.1-201ENST00000564629 3026 ntBASIC18.09■□□□□ 0.49
PER3P56645 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PER3P56645 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms