Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH13P55290 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH13P55290 AC105036.2-201ENST00000569468 176 ntBASIC19.19■□□□□ 0.66
CDH13P55290 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDH13P55290 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH13P55290 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH13P55290 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 MKRN4P-201ENST00000444706 1521 ntBASIC19.19■□□□□ 0.66
CDH13P55290 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH13P55290 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDH13P55290 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CDH13P55290 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH13P55290 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH13P55290 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH13P55290 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH13P55290 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH13P55290 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH13P55290 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH13P55290 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH13P55290 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH13P55290 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH13P55290 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH13P55290 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CDH13P55290 TNXA-203ENST00000507684 2038 ntBASIC19.18■□□□□ 0.66
CDH13P55290 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDH13P55290 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH13P55290 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH13P55290 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH13P55290 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH13P55290 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH13P55290 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH13P55290 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CDH13P55290 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH13P55290 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.17■□□□□ 0.66
CDH13P55290 AF201337.1-201ENST00000520239 748 ntBASIC19.17■□□□□ 0.66
CDH13P55290 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CDH13P55290 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDH13P55290 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH13P55290 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.17■□□□□ 0.66
CDH13P55290 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH13P55290 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CDH13P55290 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH13P55290 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDH13P55290 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH13P55290 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH13P55290 AC018553.1-201ENST00000616682 1458 ntBASIC19.16■□□□□ 0.66
CDH13P55290 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH13P55290 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH13P55290 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH13P55290 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH13P55290 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH13P55290 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH13P55290 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH13P55290 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH13P55290 BX276092.2-201ENST00000417668 665 ntBASIC19.16■□□□□ 0.66
CDH13P55290 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.16■□□□□ 0.66
CDH13P55290 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH13P55290 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH13P55290 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CDH13P55290 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH13P55290 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH13P55290 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDH13P55290 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CDH13P55290 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH13P55290 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH13P55290 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH13P55290 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH13P55290 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH13P55290 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDH13P55290 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDH13P55290 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CDH13P55290 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CDH13P55290 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CDH13P55290 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDH13P55290 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH13P55290 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH13P55290 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH13P55290 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CDH13P55290 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH13P55290 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms