Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HADHBP55084 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HADHBP55084 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HADHBP55084 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HADHBP55084 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.56■□□□□ 0.88
HADHBP55084 ZNF815P-204ENST00000434898 1737 ntBASIC20.56■□□□□ 0.88
HADHBP55084 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.56■□□□□ 0.88
HADHBP55084 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
HADHBP55084 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.56■□□□□ 0.88
HADHBP55084 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.56■□□□□ 0.88
HADHBP55084 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.56■□□□□ 0.88
HADHBP55084 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.56■□□□□ 0.88
HADHBP55084 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.56■□□□□ 0.88
HADHBP55084 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HADHBP55084 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HADHBP55084 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HADHBP55084 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HADHBP55084 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.55■□□□□ 0.88
HADHBP55084 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.55■□□□□ 0.88
HADHBP55084 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.55■□□□□ 0.88
HADHBP55084 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.55■□□□□ 0.88
HADHBP55084 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HADHBP55084 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HADHBP55084 CROCCP5-201ENST00000436658 830 ntBASIC20.55■□□□□ 0.88
HADHBP55084 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HADHBP55084 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HADHBP55084 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.55■□□□□ 0.88
HADHBP55084 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HADHBP55084 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
HADHBP55084 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.55■□□□□ 0.88
HADHBP55084 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HADHBP55084 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HADHBP55084 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.55■□□□□ 0.88
HADHBP55084 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HADHBP55084 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.55■□□□□ 0.88
HADHBP55084 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HADHBP55084 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
HADHBP55084 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.54■□□□□ 0.88
HADHBP55084 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HADHBP55084 MIR663A-201ENST00000385250 93 ntBASIC20.54■□□□□ 0.88
HADHBP55084 MIPEPP3-201ENST00000412105 444 ntBASIC20.54■□□□□ 0.88
HADHBP55084 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HADHBP55084 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HADHBP55084 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HADHBP55084 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.54■□□□□ 0.88
HADHBP55084 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.54■□□□□ 0.88
HADHBP55084 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.54■□□□□ 0.88
HADHBP55084 IKBKGP1-201ENST00000612193 1073 ntBASIC20.54■□□□□ 0.88
HADHBP55084 AC092118.2-201ENST00000613495 667 ntBASIC20.54■□□□□ 0.88
HADHBP55084 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.54■□□□□ 0.88
HADHBP55084 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HADHBP55084 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HADHBP55084 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.54■□□□□ 0.88
HADHBP55084 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HADHBP55084 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.54■□□□□ 0.88
HADHBP55084 TEX21P-204ENST00000641479 1693 ntBASIC20.54■□□□□ 0.88
HADHBP55084 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HADHBP55084 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HADHBP55084 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.53■□□□□ 0.88
HADHBP55084 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HADHBP55084 AL138781.2-201ENST00000617896 1843 ntBASIC20.53■□□□□ 0.88
HADHBP55084 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HADHBP55084 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HADHBP55084 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
HADHBP55084 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.53■□□□□ 0.88
HADHBP55084 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.53■□□□□ 0.88
HADHBP55084 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.53■□□□□ 0.88
HADHBP55084 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.53■□□□□ 0.88
HADHBP55084 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.53■□□□□ 0.88
HADHBP55084 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.53■□□□□ 0.88
HADHBP55084 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HADHBP55084 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HADHBP55084 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HADHBP55084 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HADHBP55084 AL161938.1-201ENST00000569833 2180 ntBASIC20.53■□□□□ 0.88
HADHBP55084 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HADHBP55084 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HADHBP55084 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HADHBP55084 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HADHBP55084 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.53■□□□□ 0.88
HADHBP55084 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HADHBP55084 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HADHBP55084 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HADHBP55084 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.52■□□□□ 0.88
HADHBP55084 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HADHBP55084 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HADHBP55084 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms