Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMSP52788 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMSP52788 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMSP52788 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.35■□□□□ 0.53
SMSP52788 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMSP52788 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SMSP52788 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SMSP52788 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMSP52788 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.35■□□□□ 0.53
SMSP52788 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
SMSP52788 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.35■□□□□ 0.53
SMSP52788 AL158211.5-201ENST00000623583 2518 ntBASIC18.35■□□□□ 0.53
SMSP52788 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMSP52788 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMSP52788 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMSP52788 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SMSP52788 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMSP52788 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SMSP52788 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.34■□□□□ 0.53
SMSP52788 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SMSP52788 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 AC007322.3-201ENST00000426526 701 ntBASIC18.34■□□□□ 0.53
SMSP52788 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.34■□□□□ 0.53
SMSP52788 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.34■□□□□ 0.53
SMSP52788 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 SOX15-203ENST00000570788 1093 ntBASIC18.34■□□□□ 0.53
SMSP52788 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.34■□□□□ 0.53
SMSP52788 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.34■□□□□ 0.53
SMSP52788 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 TMEM179-206ENST00000616017 1645 ntBASIC18.34■□□□□ 0.53
SMSP52788 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMSP52788 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMSP52788 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMSP52788 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMSP52788 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMSP52788 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMSP52788 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMSP52788 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMSP52788 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMSP52788 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.33■□□□□ 0.53
SMSP52788 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMSP52788 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMSP52788 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMSP52788 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.33■□□□□ 0.53
SMSP52788 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.33■□□□□ 0.53
SMSP52788 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMSP52788 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMSP52788 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMSP52788 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMSP52788 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMSP52788 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SMSP52788 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.33■□□□□ 0.52
SMSP52788 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.33■□□□□ 0.52
SMSP52788 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMSP52788 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SMSP52788 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SMSP52788 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SMSP52788 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMSP52788 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMSP52788 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMSP52788 AIRN-201ENST00000601203 4374 ntBASIC18.33■□□□□ 0.52
SMSP52788 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMSP52788 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SMSP52788 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.33■□□□□ 0.52
SMSP52788 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
SMSP52788 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SMSP52788 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.33■□□□□ 0.52
SMSP52788 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMSP52788 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.32■□□□□ 0.52
SMSP52788 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMSP52788 DPP3P2-201ENST00000416030 1696 ntBASIC18.32■□□□□ 0.52
SMSP52788 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
SMSP52788 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SMSP52788 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.32■□□□□ 0.52
SMSP52788 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMSP52788 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SMSP52788 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMSP52788 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMSP52788 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMSP52788 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMSP52788 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SMSP52788 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMSP52788 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.32■□□□□ 0.52
SMSP52788 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.32■□□□□ 0.52
SMSP52788 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
SMSP52788 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms