Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1A1P48729 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1A1P48729 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.47■□□□□ 0.39
CSNK1A1P48729 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 TFP1-202ENST00000475455 1573 ntBASIC17.46■□□□□ 0.39
CSNK1A1P48729 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1A1P48729 AC125437.2-201ENST00000625180 2167 ntBASIC17.46■□□□□ 0.39
CSNK1A1P48729 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.46■□□□□ 0.39
CSNK1A1P48729 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1A1P48729 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.45■□□□□ 0.38
CSNK1A1P48729 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1A1P48729 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CSNK1A1P48729 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CSNK1A1P48729 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.45■□□□□ 0.38
CSNK1A1P48729 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
CSNK1A1P48729 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1A1P48729 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1A1P48729 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1A1P48729 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CSNK1A1P48729 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
CSNK1A1P48729 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
CSNK1A1P48729 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.44■□□□□ 0.38
CSNK1A1P48729 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
CSNK1A1P48729 AP003097.1-201ENST00000530657 1135 ntBASIC17.44■□□□□ 0.38
CSNK1A1P48729 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CSNK1A1P48729 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1A1P48729 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.44■□□□□ 0.38
CSNK1A1P48729 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1A1P48729 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1A1P48729 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1A1P48729 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1A1P48729 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1A1P48729 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1A1P48729 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1A1P48729 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1A1P48729 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms