Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6CP48668 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6CP48668 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6CP48668 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6CP48668 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6CP48668 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
KRT6CP48668 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.01■□□□□ 0.63
KRT6CP48668 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6CP48668 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6CP48668 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
KRT6CP48668 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.01■□□□□ 0.63
KRT6CP48668 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6CP48668 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
KRT6CP48668 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.01■□□□□ 0.63
KRT6CP48668 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
KRT6CP48668 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19■□□□□ 0.63
KRT6CP48668 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19■□□□□ 0.63
KRT6CP48668 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19■□□□□ 0.63
KRT6CP48668 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19■□□□□ 0.63
KRT6CP48668 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19■□□□□ 0.63
KRT6CP48668 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19■□□□□ 0.63
KRT6CP48668 CROCCP5-201ENST00000436658 830 ntBASIC19■□□□□ 0.63
KRT6CP48668 AC006970.2-201ENST00000450065 779 ntBASIC19■□□□□ 0.63
KRT6CP48668 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19■□□□□ 0.63
KRT6CP48668 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19■□□□□ 0.63
KRT6CP48668 AL121832.2-201ENST00000610979 668 ntBASIC19■□□□□ 0.63
KRT6CP48668 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19■□□□□ 0.63
KRT6CP48668 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19■□□□□ 0.63
KRT6CP48668 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19■□□□□ 0.63
KRT6CP48668 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
KRT6CP48668 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
KRT6CP48668 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
KRT6CP48668 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
KRT6CP48668 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19■□□□□ 0.63
KRT6CP48668 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6CP48668 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.99■□□□□ 0.63
KRT6CP48668 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6CP48668 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6CP48668 AC018553.1-201ENST00000616682 1458 ntBASIC18.99■□□□□ 0.63
KRT6CP48668 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6CP48668 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6CP48668 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT6CP48668 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.99■□□□□ 0.63
KRT6CP48668 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6CP48668 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT6CP48668 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6CP48668 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6CP48668 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT6CP48668 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.99■□□□□ 0.63
KRT6CP48668 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT6CP48668 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
KRT6CP48668 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
KRT6CP48668 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT6CP48668 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6CP48668 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6CP48668 AC116351.2-201ENST00000606540 1585 ntBASIC18.98■□□□□ 0.63
KRT6CP48668 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KRT6CP48668 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT6CP48668 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6CP48668 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT6CP48668 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6CP48668 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT6CP48668 MIPEPP3-201ENST00000412105 444 ntBASIC18.98■□□□□ 0.63
KRT6CP48668 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT6CP48668 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6CP48668 AC083906.2-201ENST00000511578 360 ntBASIC18.98■□□□□ 0.63
KRT6CP48668 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT6CP48668 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.98■□□□□ 0.63
KRT6CP48668 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT6CP48668 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT6CP48668 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
KRT6CP48668 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KRT6CP48668 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6CP48668 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT6CP48668 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRT6CP48668 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT6CP48668 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT6CP48668 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT6CP48668 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT6CP48668 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
KRT6CP48668 AC073210.2-201ENST00000430369 194 ntBASIC18.97■□□□□ 0.63
KRT6CP48668 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.97■□□□□ 0.63
KRT6CP48668 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.97■□□□□ 0.63
KRT6CP48668 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT6CP48668 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
KRT6CP48668 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT6CP48668 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.97■□□□□ 0.63
KRT6CP48668 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
KRT6CP48668 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms