Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.73■□□□□ 0.59
XCR1P46094 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XCR1P46094 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.72■□□□□ 0.59
XCR1P46094 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
XCR1P46094 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
XCR1P46094 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XCR1P46094 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
XCR1P46094 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.72■□□□□ 0.59
XCR1P46094 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XCR1P46094 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XCR1P46094 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XCR1P46094 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.72■□□□□ 0.59
XCR1P46094 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.72■□□□□ 0.59
XCR1P46094 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.72■□□□□ 0.59
XCR1P46094 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
XCR1P46094 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.72■□□□□ 0.59
XCR1P46094 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.72■□□□□ 0.59
XCR1P46094 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
XCR1P46094 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.72■□□□□ 0.59
XCR1P46094 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.72■□□□□ 0.59
XCR1P46094 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.72■□□□□ 0.59
XCR1P46094 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.72■□□□□ 0.59
XCR1P46094 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
XCR1P46094 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
XCR1P46094 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XCR1P46094 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XCR1P46094 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
XCR1P46094 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.72■□□□□ 0.59
XCR1P46094 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
XCR1P46094 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XCR1P46094 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
XCR1P46094 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XCR1P46094 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XCR1P46094 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
XCR1P46094 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XCR1P46094 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.71■□□□□ 0.59
XCR1P46094 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
XCR1P46094 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XCR1P46094 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XCR1P46094 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
XCR1P46094 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XCR1P46094 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.71■□□□□ 0.59
XCR1P46094 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.71■□□□□ 0.59
XCR1P46094 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
XCR1P46094 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
XCR1P46094 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.71■□□□□ 0.59
XCR1P46094 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.71■□□□□ 0.59
XCR1P46094 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.71■□□□□ 0.59
XCR1P46094 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
XCR1P46094 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
XCR1P46094 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
XCR1P46094 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
XCR1P46094 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.71■□□□□ 0.59
XCR1P46094 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.71■□□□□ 0.59
XCR1P46094 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.71■□□□□ 0.58
XCR1P46094 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.71■□□□□ 0.58
XCR1P46094 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.7■□□□□ 0.58
XCR1P46094 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
XCR1P46094 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
XCR1P46094 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
XCR1P46094 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XCR1P46094 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
XCR1P46094 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XCR1P46094 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XCR1P46094 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XCR1P46094 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
XCR1P46094 KRASP1-201ENST00000407852 552 ntBASIC18.7■□□□□ 0.58
XCR1P46094 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.7■□□□□ 0.58
XCR1P46094 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.7■□□□□ 0.58
XCR1P46094 AC124016.1-201ENST00000609552 612 ntBASIC18.7■□□□□ 0.58
XCR1P46094 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.7■□□□□ 0.58
XCR1P46094 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
XCR1P46094 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.7■□□□□ 0.58
XCR1P46094 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
XCR1P46094 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.69■□□□□ 0.58
XCR1P46094 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.69■□□□□ 0.58
XCR1P46094 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
XCR1P46094 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
XCR1P46094 AC116562.4-201ENST00000641316 2276 ntBASIC18.69■□□□□ 0.58
XCR1P46094 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.69■□□□□ 0.58
XCR1P46094 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.69■□□□□ 0.58
XCR1P46094 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.69■□□□□ 0.58
XCR1P46094 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.69■□□□□ 0.58
XCR1P46094 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XCR1P46094 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
XCR1P46094 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
XCR1P46094 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms