Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA4P43681 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.82■□□□□ 0.76
CHRNA4P43681 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA4P43681 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.82■□□□□ 0.76
CHRNA4P43681 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CHRNA4P43681 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA4P43681 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA4P43681 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.82■□□□□ 0.76
CHRNA4P43681 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA4P43681 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA4P43681 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHRNA4P43681 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA4P43681 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA4P43681 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNA4P43681 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CHRNA4P43681 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA4P43681 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA4P43681 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CHRNA4P43681 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNA4P43681 AC026366.1-201ENST00000488803 879 ntBASIC19.81■□□□□ 0.76
CHRNA4P43681 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.81■□□□□ 0.76
CHRNA4P43681 CD99P1-205ENST00000527459 561 ntBASIC19.81■□□□□ 0.76
CHRNA4P43681 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
CHRNA4P43681 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA4P43681 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.81■□□□□ 0.76
CHRNA4P43681 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.81■□□□□ 0.76
CHRNA4P43681 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA4P43681 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA4P43681 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA4P43681 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNA4P43681 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA4P43681 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CHRNA4P43681 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA4P43681 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA4P43681 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHRNA4P43681 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 ESRRAP1-201ENST00000400596 1257 ntBASIC19.8■□□□□ 0.76
CHRNA4P43681 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.8■□□□□ 0.76
CHRNA4P43681 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA4P43681 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA4P43681 AC007952.6-201ENST00000573168 2673 ntBASIC19.8■□□□□ 0.76
CHRNA4P43681 AC003957.1-201ENST00000625108 2673 ntBASIC19.8■□□□□ 0.76
CHRNA4P43681 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.8■□□□□ 0.76
CHRNA4P43681 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.8■□□□□ 0.76
CHRNA4P43681 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHRNA4P43681 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA4P43681 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CHRNA4P43681 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHRNA4P43681 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNA4P43681 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CHRNA4P43681 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.79■□□□□ 0.76
CHRNA4P43681 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.79■□□□□ 0.76
CHRNA4P43681 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA4P43681 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA4P43681 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA4P43681 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA4P43681 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHRNA4P43681 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNA4P43681 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHRNA4P43681 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA4P43681 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNA4P43681 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA4P43681 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA4P43681 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA4P43681 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA4P43681 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.78■□□□□ 0.76
CHRNA4P43681 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.78■□□□□ 0.76
CHRNA4P43681 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA4P43681 AL121829.2-201ENST00000620908 328 ntBASIC19.78■□□□□ 0.76
CHRNA4P43681 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA4P43681 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHRNA4P43681 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA4P43681 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA4P43681 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms