Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.64■□□□□ 0.89
PCK1P35558 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.64■□□□□ 0.89
PCK1P35558 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.64■□□□□ 0.89
PCK1P35558 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.64■□□□□ 0.89
PCK1P35558 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.64■□□□□ 0.89
PCK1P35558 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.64■□□□□ 0.89
PCK1P35558 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PCK1P35558 AC133041.1-202ENST00000642053 222 ntBASIC20.64■□□□□ 0.89
PCK1P35558 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCK1P35558 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCK1P35558 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.64■□□□□ 0.89
PCK1P35558 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCK1P35558 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCK1P35558 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCK1P35558 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCK1P35558 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PCK1P35558 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
PCK1P35558 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCK1P35558 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCK1P35558 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.63■□□□□ 0.89
PCK1P35558 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCK1P35558 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCK1P35558 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCK1P35558 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCK1P35558 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.63■□□□□ 0.89
PCK1P35558 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.63■□□□□ 0.89
PCK1P35558 AC098934.4-201ENST00000564127 592 ntBASIC20.63■□□□□ 0.89
PCK1P35558 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCK1P35558 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.63■□□□□ 0.89
PCK1P35558 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCK1P35558 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCK1P35558 AL158211.5-201ENST00000623583 2518 ntBASIC20.63■□□□□ 0.89
PCK1P35558 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCK1P35558 AC116351.2-201ENST00000606540 1585 ntBASIC20.63■□□□□ 0.89
PCK1P35558 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCK1P35558 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.63■□□□□ 0.89
PCK1P35558 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.62■□□□□ 0.89
PCK1P35558 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.62■□□□□ 0.89
PCK1P35558 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.62■□□□□ 0.89
PCK1P35558 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.62■□□□□ 0.89
PCK1P35558 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
PCK1P35558 AC069152.1-201ENST00000438030 544 ntBASIC20.62■□□□□ 0.89
PCK1P35558 AC083880.1-201ENST00000608266 535 ntBASIC20.62■□□□□ 0.89
PCK1P35558 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.62■□□□□ 0.89
PCK1P35558 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCK1P35558 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.62■□□□□ 0.89
PCK1P35558 AC018553.1-201ENST00000616682 1458 ntBASIC20.62■□□□□ 0.89
PCK1P35558 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCK1P35558 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCK1P35558 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCK1P35558 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCK1P35558 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.61■□□□□ 0.89
PCK1P35558 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCK1P35558 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCK1P35558 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCK1P35558 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.61■□□□□ 0.89
PCK1P35558 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCK1P35558 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.61■□□□□ 0.89
PCK1P35558 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCK1P35558 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.61■□□□□ 0.89
PCK1P35558 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCK1P35558 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.61■□□□□ 0.89
PCK1P35558 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCK1P35558 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCK1P35558 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCK1P35558 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCK1P35558 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.61■□□□□ 0.89
PCK1P35558 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCK1P35558 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCK1P35558 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.6■□□□□ 0.89
PCK1P35558 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCK1P35558 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.6■□□□□ 0.89
PCK1P35558 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.6■□□□□ 0.89
PCK1P35558 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.6■□□□□ 0.89
PCK1P35558 AC060766.5-201ENST00000590539 871 ntBASIC20.6■□□□□ 0.89
PCK1P35558 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCK1P35558 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms