Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.82■□□□□ 0.76
RPA3P35244 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPA3P35244 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.81■□□□□ 0.76
RPA3P35244 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RPA3P35244 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.81■□□□□ 0.76
RPA3P35244 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.81■□□□□ 0.76
RPA3P35244 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.81■□□□□ 0.76
RPA3P35244 LINC01465-201ENST00000408887 1940 ntBASIC19.81■□□□□ 0.76
RPA3P35244 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
RPA3P35244 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.81■□□□□ 0.76
RPA3P35244 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.81■□□□□ 0.76
RPA3P35244 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.81■□□□□ 0.76
RPA3P35244 AF201337.1-201ENST00000520239 748 ntBASIC19.81■□□□□ 0.76
RPA3P35244 AC105036.2-201ENST00000569468 176 ntBASIC19.81■□□□□ 0.76
RPA3P35244 AC133552.2-202ENST00000575694 574 ntBASIC19.81■□□□□ 0.76
RPA3P35244 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.81■□□□□ 0.76
RPA3P35244 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPA3P35244 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPA3P35244 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.81■□□□□ 0.76
RPA3P35244 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPA3P35244 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RPA3P35244 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPA3P35244 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPA3P35244 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPA3P35244 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.8■□□□□ 0.76
RPA3P35244 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RPA3P35244 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RPA3P35244 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RPA3P35244 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.8■□□□□ 0.76
RPA3P35244 AL121832.2-201ENST00000610979 668 ntBASIC19.8■□□□□ 0.76
RPA3P35244 AL356652.1-201ENST00000615962 565 ntBASIC19.8■□□□□ 0.76
RPA3P35244 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
RPA3P35244 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RPA3P35244 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPA3P35244 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.79■□□□□ 0.76
RPA3P35244 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
RPA3P35244 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.79■□□□□ 0.76
RPA3P35244 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.79■□□□□ 0.76
RPA3P35244 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.79■□□□□ 0.76
RPA3P35244 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.79■□□□□ 0.76
RPA3P35244 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.79■□□□□ 0.76
RPA3P35244 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.79■□□□□ 0.76
RPA3P35244 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
RPA3P35244 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
RPA3P35244 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.79■□□□□ 0.76
RPA3P35244 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.79■□□□□ 0.76
RPA3P35244 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPA3P35244 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.79■□□□□ 0.76
RPA3P35244 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPA3P35244 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.78■□□□□ 0.76
RPA3P35244 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPA3P35244 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPA3P35244 PTBP1P-201ENST00000554374 1601 ntBASIC19.78■□□□□ 0.76
RPA3P35244 MCRIP2P1-201ENST00000394346 511 ntBASIC19.78■□□□□ 0.76
RPA3P35244 AL512625.2-201ENST00000417533 625 ntBASIC19.78■□□□□ 0.76
RPA3P35244 PGM5P4-201ENST00000421970 445 ntBASIC19.78■□□□□ 0.76
RPA3P35244 AC093787.1-201ENST00000450396 207 ntBASIC19.78■□□□□ 0.76
RPA3P35244 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.78■□□□□ 0.76
RPA3P35244 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.78■□□□□ 0.76
RPA3P35244 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.78■□□□□ 0.76
RPA3P35244 AC100791.3-201ENST00000617619 330 ntBASIC19.78■□□□□ 0.76
RPA3P35244 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPA3P35244 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPA3P35244 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RPA3P35244 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.78■□□□□ 0.76
RPA3P35244 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPA3P35244 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.78■□□□□ 0.76
RPA3P35244 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPA3P35244 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.78■□□□□ 0.76
RPA3P35244 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPA3P35244 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPA3P35244 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
RPA3P35244 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPA3P35244 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPA3P35244 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPA3P35244 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPA3P35244 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms