Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCND1P24385 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCND1P24385 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.71■□□□□ 0.75
CCND1P24385 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.71■□□□□ 0.75
CCND1P24385 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.71■□□□□ 0.75
CCND1P24385 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.71■□□□□ 0.75
CCND1P24385 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCND1P24385 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.71■□□□□ 0.75
CCND1P24385 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCND1P24385 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCND1P24385 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCND1P24385 AL138781.2-201ENST00000617896 1843 ntBASIC19.71■□□□□ 0.75
CCND1P24385 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCND1P24385 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCND1P24385 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCND1P24385 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
CCND1P24385 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCND1P24385 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCND1P24385 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.7■□□□□ 0.74
CCND1P24385 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 MIR663A-201ENST00000385250 93 ntBASIC19.7■□□□□ 0.74
CCND1P24385 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.7■□□□□ 0.74
CCND1P24385 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.7■□□□□ 0.74
CCND1P24385 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCND1P24385 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCND1P24385 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CCND1P24385 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCND1P24385 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.69■□□□□ 0.74
CCND1P24385 AC010980.2-201ENST00000587099 1412 ntBASIC19.69■□□□□ 0.74
CCND1P24385 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 AC092720.2-201ENST00000602388 1665 ntBASIC19.69■□□□□ 0.74
CCND1P24385 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCND1P24385 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCND1P24385 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.69■□□□□ 0.74
CCND1P24385 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.69■□□□□ 0.74
CCND1P24385 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 AC006970.2-201ENST00000450065 779 ntBASIC19.69■□□□□ 0.74
CCND1P24385 AF201337.1-201ENST00000520239 748 ntBASIC19.69■□□□□ 0.74
CCND1P24385 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.69■□□□□ 0.74
CCND1P24385 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.69■□□□□ 0.74
CCND1P24385 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.69■□□□□ 0.74
CCND1P24385 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCND1P24385 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCND1P24385 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCND1P24385 AC079598.2-202ENST00000546624 1451 ntBASIC19.68■□□□□ 0.74
CCND1P24385 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCND1P24385 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCND1P24385 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCND1P24385 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 KRT18P68-201ENST00000392293 1000 ntBASIC19.68■□□□□ 0.74
CCND1P24385 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.68■□□□□ 0.74
CCND1P24385 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CCND1P24385 CYP2T3P-201ENST00000601990 817 ntBASIC19.68■□□□□ 0.74
CCND1P24385 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
CCND1P24385 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCND1P24385 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCND1P24385 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCND1P24385 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCND1P24385 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCND1P24385 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCND1P24385 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCND1P24385 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCND1P24385 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCND1P24385 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms