Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPL35AP18077 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL35AP18077 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RPL35AP18077 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL35AP18077 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPL35AP18077 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL35AP18077 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.6□□□□□ -0.07
RPL35AP18077 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPL35AP18077 BX119927.1-201ENST00000636596 1552 ntBASIC14.6□□□□□ -0.07
RPL35AP18077 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPL35AP18077 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RPL35AP18077 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.59□□□□□ -0.07
RPL35AP18077 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.59□□□□□ -0.07
RPL35AP18077 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RPL35AP18077 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RPL35AP18077 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
RPL35AP18077 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RPL35AP18077 NBPF21P-201ENST00000425093 1451 ntBASIC14.59□□□□□ -0.07
RPL35AP18077 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.59□□□□□ -0.07
RPL35AP18077 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RPL35AP18077 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
RPL35AP18077 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.59□□□□□ -0.07
RPL35AP18077 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.59□□□□□ -0.07
RPL35AP18077 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.59□□□□□ -0.07
RPL35AP18077 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.59□□□□□ -0.07
RPL35AP18077 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.59□□□□□ -0.07
RPL35AP18077 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RPL35AP18077 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.59□□□□□ -0.07
RPL35AP18077 AC110285.5-201ENST00000611501 352 ntBASIC14.59□□□□□ -0.07
RPL35AP18077 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.59□□□□□ -0.07
RPL35AP18077 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.59□□□□□ -0.07
RPL35AP18077 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.59□□□□□ -0.07
RPL35AP18077 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.59□□□□□ -0.07
RPL35AP18077 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL35AP18077 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.59□□□□□ -0.07
RPL35AP18077 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.58□□□□□ -0.07
RPL35AP18077 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RPL35AP18077 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RPL35AP18077 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RPL35AP18077 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.58□□□□□ -0.07
RPL35AP18077 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RPL35AP18077 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.58□□□□□ -0.07
RPL35AP18077 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.58□□□□□ -0.07
RPL35AP18077 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
RPL35AP18077 AC018553.1-201ENST00000616682 1458 ntBASIC14.58□□□□□ -0.08
RPL35AP18077 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.58□□□□□ -0.08
RPL35AP18077 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
RPL35AP18077 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RPL35AP18077 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPL35AP18077 BCL2-203ENST00000589955 5011 ntBASIC14.58□□□□□ -0.08
RPL35AP18077 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
RPL35AP18077 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
RPL35AP18077 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPL35AP18077 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RPL35AP18077 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.58□□□□□ -0.08
RPL35AP18077 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.58□□□□□ -0.08
RPL35AP18077 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
RPL35AP18077 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.58□□□□□ -0.08
RPL35AP18077 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
RPL35AP18077 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.58□□□□□ -0.08
RPL35AP18077 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.58□□□□□ -0.08
RPL35AP18077 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.58□□□□□ -0.08
RPL35AP18077 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.58□□□□□ -0.08
RPL35AP18077 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
RPL35AP18077 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.58□□□□□ -0.08
RPL35AP18077 PHGDH-210ENST00000641115 1638 ntBASIC14.58□□□□□ -0.08
RPL35AP18077 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPL35AP18077 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RPL35AP18077 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPL35AP18077 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RPL35AP18077 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
RPL35AP18077 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
RPL35AP18077 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.57□□□□□ -0.08
RPL35AP18077 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
RPL35AP18077 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPL35AP18077 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPL35AP18077 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.57□□□□□ -0.08
RPL35AP18077 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPL35AP18077 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPL35AP18077 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPL35AP18077 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.57□□□□□ -0.08
RPL35AP18077 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPL35AP18077 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPL35AP18077 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RPL35AP18077 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms