Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.18■■□□□ 1.46
COL11A2P13942 AF106564.1-201ENST00000607058 2553 ntBASIC24.18■■□□□ 1.46
COL11A2P13942 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.18■■□□□ 1.46
COL11A2P13942 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.18■■□□□ 1.46
COL11A2P13942 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL11A2P13942 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL11A2P13942 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC24.17■■□□□ 1.46
COL11A2P13942 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
COL11A2P13942 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL11A2P13942 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.17■■□□□ 1.46
COL11A2P13942 AL353719.1-201ENST00000566847 864 ntBASIC24.17■■□□□ 1.46
COL11A2P13942 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.17■■□□□ 1.46
COL11A2P13942 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.17■■□□□ 1.46
COL11A2P13942 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
COL11A2P13942 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.17■■□□□ 1.46
COL11A2P13942 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL11A2P13942 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.17■■□□□ 1.46
COL11A2P13942 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL11A2P13942 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL11A2P13942 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL11A2P13942 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.16■■□□□ 1.46
COL11A2P13942 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL11A2P13942 SPDYE15P-201ENST00000424157 909 ntBASIC24.16■■□□□ 1.46
COL11A2P13942 TSPY21P-201ENST00000433481 731 ntBASIC24.16■■□□□ 1.46
COL11A2P13942 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.16■■□□□ 1.46
COL11A2P13942 TSPY23P-201ENST00000440136 739 ntBASIC24.16■■□□□ 1.46
COL11A2P13942 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC24.16■■□□□ 1.46
COL11A2P13942 HOMER2P1-201ENST00000455653 964 ntBASIC24.16■■□□□ 1.46
COL11A2P13942 CA15P1-201ENST00000481698 905 ntBASIC24.16■■□□□ 1.46
COL11A2P13942 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL11A2P13942 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC24.16■■□□□ 1.46
COL11A2P13942 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL11A2P13942 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL11A2P13942 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.16■■□□□ 1.46
COL11A2P13942 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL11A2P13942 SPDYE13P-201ENST00000445314 798 ntBASIC24.15■■□□□ 1.46
COL11A2P13942 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.15■■□□□ 1.46
COL11A2P13942 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL11A2P13942 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
COL11A2P13942 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL11A2P13942 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL11A2P13942 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL11A2P13942 AC006128.1-201ENST00000624704 1661 ntBASIC24.15■■□□□ 1.46
COL11A2P13942 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.15■■□□□ 1.46
COL11A2P13942 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.15■■□□□ 1.46
COL11A2P13942 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC24.15■■□□□ 1.46
COL11A2P13942 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC24.15■■□□□ 1.46
COL11A2P13942 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC24.15■■□□□ 1.46
COL11A2P13942 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.15■■□□□ 1.46
COL11A2P13942 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL11A2P13942 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
COL11A2P13942 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
COL11A2P13942 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.14■■□□□ 1.46
COL11A2P13942 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL11A2P13942 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL11A2P13942 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL11A2P13942 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
COL11A2P13942 VENTXP5-201ENST00000523979 775 ntBASIC24.14■■□□□ 1.45
COL11A2P13942 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.14■■□□□ 1.45
COL11A2P13942 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC24.14■■□□□ 1.45
COL11A2P13942 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC24.14■■□□□ 1.45
COL11A2P13942 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
COL11A2P13942 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.14■■□□□ 1.45
COL11A2P13942 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL11A2P13942 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL11A2P13942 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.14■■□□□ 1.45
COL11A2P13942 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
COL11A2P13942 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.14■■□□□ 1.45
COL11A2P13942 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL11A2P13942 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.14■■□□□ 1.45
COL11A2P13942 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
COL11A2P13942 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL11A2P13942 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL11A2P13942 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC24.13■■□□□ 1.45
COL11A2P13942 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL11A2P13942 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL11A2P13942 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.13■■□□□ 1.45
COL11A2P13942 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
COL11A2P13942 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.13■■□□□ 1.45
COL11A2P13942 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL11A2P13942 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL11A2P13942 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL11A2P13942 PP7080-204ENST00000510714 601 ntTSL 3 BASIC24.13■■□□□ 1.45
COL11A2P13942 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL11A2P13942 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.12■■□□□ 1.45
COL11A2P13942 KRT8P41-201ENST00000533985 1514 ntBASIC24.12■■□□□ 1.45
COL11A2P13942 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL11A2P13942 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL11A2P13942 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.12■■□□□ 1.45
COL11A2P13942 PTK2-216ENST00000519881 863 ntTSL 3 BASIC24.12■■□□□ 1.45
COL11A2P13942 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC24.12■■□□□ 1.45
COL11A2P13942 ZNF444P1-201ENST00000559497 298 ntBASIC24.12■■□□□ 1.45
COL11A2P13942 NT5C-210ENST00000582160 860 ntTSL 2 BASIC24.12■■□□□ 1.45
COL11A2P13942 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.12■■□□□ 1.45
COL11A2P13942 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL11A2P13942 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL11A2P13942 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.12■■□□□ 1.45
COL11A2P13942 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL11A2P13942 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
COL11A2P13942 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms