Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.14■□□□□ 0.49
UBL4AP11441 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.14■□□□□ 0.49
UBL4AP11441 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.14■□□□□ 0.49
UBL4AP11441 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.14■□□□□ 0.49
UBL4AP11441 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.14■□□□□ 0.49
UBL4AP11441 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.14■□□□□ 0.49
UBL4AP11441 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
UBL4AP11441 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.14■□□□□ 0.49
UBL4AP11441 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UBL4AP11441 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBL4AP11441 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
UBL4AP11441 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
UBL4AP11441 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
UBL4AP11441 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
UBL4AP11441 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
UBL4AP11441 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.13■□□□□ 0.49
UBL4AP11441 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UBL4AP11441 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.13■□□□□ 0.49
UBL4AP11441 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.13■□□□□ 0.49
UBL4AP11441 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.13■□□□□ 0.49
UBL4AP11441 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.13■□□□□ 0.49
UBL4AP11441 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.13■□□□□ 0.49
UBL4AP11441 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.13■□□□□ 0.49
UBL4AP11441 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.13■□□□□ 0.49
UBL4AP11441 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.13■□□□□ 0.49
UBL4AP11441 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.13■□□□□ 0.49
UBL4AP11441 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL4AP11441 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL4AP11441 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.12■□□□□ 0.49
UBL4AP11441 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.12■□□□□ 0.49
UBL4AP11441 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL4AP11441 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.12■□□□□ 0.49
UBL4AP11441 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
UBL4AP11441 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL4AP11441 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.12■□□□□ 0.49
UBL4AP11441 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL4AP11441 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL4AP11441 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.12■□□□□ 0.49
UBL4AP11441 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL4AP11441 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL4AP11441 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBL4AP11441 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL4AP11441 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.12■□□□□ 0.49
UBL4AP11441 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.12■□□□□ 0.49
UBL4AP11441 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.12■□□□□ 0.49
UBL4AP11441 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL4AP11441 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.12■□□□□ 0.49
UBL4AP11441 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
UBL4AP11441 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.12■□□□□ 0.49
UBL4AP11441 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.12■□□□□ 0.49
UBL4AP11441 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
UBL4AP11441 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL4AP11441 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
UBL4AP11441 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.11■□□□□ 0.49
UBL4AP11441 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBL4AP11441 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.11■□□□□ 0.49
UBL4AP11441 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.11■□□□□ 0.49
UBL4AP11441 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.11■□□□□ 0.49
UBL4AP11441 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.11■□□□□ 0.49
UBL4AP11441 SOX15-203ENST00000570788 1093 ntBASIC18.11■□□□□ 0.49
UBL4AP11441 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 AC018553.1-201ENST00000616682 1458 ntBASIC18.11■□□□□ 0.49
UBL4AP11441 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.11■□□□□ 0.49
UBL4AP11441 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
UBL4AP11441 AC116351.2-201ENST00000606540 1585 ntBASIC18.11■□□□□ 0.49
UBL4AP11441 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms