Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
FREM3P0C091 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FREM3P0C091 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM3P0C091 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
FREM3P0C091 SNORA78-201ENST00000459373 127 ntBASIC17.86■□□□□ 0.45
FREM3P0C091 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.86■□□□□ 0.45
FREM3P0C091 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.86■□□□□ 0.45
FREM3P0C091 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.86■□□□□ 0.45
FREM3P0C091 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM3P0C091 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM3P0C091 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM3P0C091 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FREM3P0C091 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FREM3P0C091 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM3P0C091 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
FREM3P0C091 PRKY-204ENST00000533551 1019 ntBASIC17.85■□□□□ 0.45
FREM3P0C091 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.85■□□□□ 0.45
FREM3P0C091 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.85■□□□□ 0.45
FREM3P0C091 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.85■□□□□ 0.45
FREM3P0C091 AP001271.2-201ENST00000624018 1556 ntBASIC17.85■□□□□ 0.45
FREM3P0C091 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
FREM3P0C091 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.85■□□□□ 0.45
FREM3P0C091 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM3P0C091 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM3P0C091 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FREM3P0C091 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FREM3P0C091 AL135905.2-201ENST00000584934 1404 ntBASIC17.84■□□□□ 0.45
FREM3P0C091 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.84■□□□□ 0.45
FREM3P0C091 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 AL353807.1-201ENST00000427475 662 ntBASIC17.84■□□□□ 0.45
FREM3P0C091 TSPY7P-201ENST00000431358 1114 ntBASIC17.84■□□□□ 0.45
FREM3P0C091 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.84■□□□□ 0.45
FREM3P0C091 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
FREM3P0C091 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
FREM3P0C091 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.84■□□□□ 0.45
FREM3P0C091 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.84■□□□□ 0.45
FREM3P0C091 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.84■□□□□ 0.45
FREM3P0C091 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 TFP1-202ENST00000475455 1573 ntBASIC17.84■□□□□ 0.45
FREM3P0C091 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
FREM3P0C091 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.84■□□□□ 0.45
FREM3P0C091 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.84■□□□□ 0.45
FREM3P0C091 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
FREM3P0C091 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
FREM3P0C091 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.84■□□□□ 0.45
FREM3P0C091 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
FREM3P0C091 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FREM3P0C091 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
FREM3P0C091 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.84■□□□□ 0.45
FREM3P0C091 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.84■□□□□ 0.45
FREM3P0C091 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.83■□□□□ 0.45
FREM3P0C091 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.83■□□□□ 0.45
FREM3P0C091 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FREM3P0C091 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
FREM3P0C091 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.83■□□□□ 0.45
FREM3P0C091 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
FREM3P0C091 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
FREM3P0C091 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
FREM3P0C091 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.83■□□□□ 0.45
FREM3P0C091 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FREM3P0C091 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.83■□□□□ 0.45
FREM3P0C091 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.83■□□□□ 0.45
FREM3P0C091 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.83■□□□□ 0.45
FREM3P0C091 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
FREM3P0C091 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
FREM3P0C091 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FREM3P0C091 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FREM3P0C091 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FREM3P0C091 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.83■□□□□ 0.44
FREM3P0C091 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FREM3P0C091 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FREM3P0C091 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FREM3P0C091 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
FREM3P0C091 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FREM3P0C091 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
FREM3P0C091 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FREM3P0C091 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.83■□□□□ 0.44
FREM3P0C091 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
FREM3P0C091 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.82■□□□□ 0.44
FREM3P0C091 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.82■□□□□ 0.44
FREM3P0C091 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.82■□□□□ 0.44
FREM3P0C091 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.82■□□□□ 0.44
FREM3P0C091 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.82■□□□□ 0.44
FREM3P0C091 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.82■□□□□ 0.44
FREM3P0C091 AC004264.1-201ENST00000608354 794 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms