Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
TPM3P06753 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.99■■□□□ 1.11
TPM3P06753 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.99■■□□□ 1.11
TPM3P06753 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.98■■□□□ 1.11
TPM3P06753 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
TPM3P06753 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TPM3P06753 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.98■■□□□ 1.11
TPM3P06753 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TPM3P06753 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.98■■□□□ 1.11
TPM3P06753 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TPM3P06753 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TPM3P06753 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.98■■□□□ 1.11
TPM3P06753 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TPM3P06753 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.98■■□□□ 1.11
TPM3P06753 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.98■■□□□ 1.11
TPM3P06753 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TPM3P06753 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
TPM3P06753 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.98■■□□□ 1.11
TPM3P06753 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
TPM3P06753 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TPM3P06753 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TPM3P06753 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TPM3P06753 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TPM3P06753 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
TPM3P06753 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
TPM3P06753 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.98■■□□□ 1.11
TPM3P06753 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TPM3P06753 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.97■■□□□ 1.11
TPM3P06753 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.97■■□□□ 1.11
TPM3P06753 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
TPM3P06753 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.97■■□□□ 1.11
TPM3P06753 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.97■■□□□ 1.11
TPM3P06753 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TPM3P06753 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.97■■□□□ 1.11
TPM3P06753 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.97■■□□□ 1.11
TPM3P06753 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.97■■□□□ 1.11
TPM3P06753 AL356652.1-201ENST00000615962 565 ntBASIC21.97■■□□□ 1.11
TPM3P06753 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.97■■□□□ 1.11
TPM3P06753 AC020763.4-201ENST00000623414 4170 ntBASIC21.97■■□□□ 1.11
TPM3P06753 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
TPM3P06753 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.97■■□□□ 1.11
TPM3P06753 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TPM3P06753 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
TPM3P06753 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
TPM3P06753 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.96■■□□□ 1.11
TPM3P06753 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.96■■□□□ 1.11
TPM3P06753 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.96■■□□□ 1.11
TPM3P06753 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.96■■□□□ 1.11
TPM3P06753 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM3P06753 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TPM3P06753 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
TPM3P06753 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
TPM3P06753 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
TPM3P06753 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TPM3P06753 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
TPM3P06753 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TPM3P06753 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 AC142381.2-201ENST00000566120 298 ntBASIC21.95■■□□□ 1.1
TPM3P06753 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.95■■□□□ 1.1
TPM3P06753 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.95■■□□□ 1.1
TPM3P06753 AC087633.2-202ENST00000565166 1439 ntBASIC21.95■■□□□ 1.1
TPM3P06753 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.95■■□□□ 1.1
TPM3P06753 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM3P06753 AL390961.4-201ENST00000623958 2535 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms