Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
RB1P06400 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
RB1P06400 Z85996.1-201ENST00000494644 937 ntBASIC20.84■□□□□ 0.93
RB1P06400 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.84■□□□□ 0.93
RB1P06400 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.84■□□□□ 0.93
RB1P06400 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.84■□□□□ 0.93
RB1P06400 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RB1P06400 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RB1P06400 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RB1P06400 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.83■□□□□ 0.93
RB1P06400 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RB1P06400 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RB1P06400 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RB1P06400 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RB1P06400 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RB1P06400 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.83■□□□□ 0.93
RB1P06400 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.83■□□□□ 0.93
RB1P06400 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.83■□□□□ 0.93
RB1P06400 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.83■□□□□ 0.93
RB1P06400 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RB1P06400 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.83■□□□□ 0.93
RB1P06400 AL121894.2-201ENST00000602977 491 ntBASIC20.83■□□□□ 0.93
RB1P06400 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
RB1P06400 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RB1P06400 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.83■□□□□ 0.93
RB1P06400 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RB1P06400 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.83■□□□□ 0.92
RB1P06400 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RB1P06400 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
RB1P06400 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.83■□□□□ 0.92
RB1P06400 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.82■□□□□ 0.92
RB1P06400 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RB1P06400 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RB1P06400 FP700111.2-201ENST00000619190 1892 ntBASIC20.82■□□□□ 0.92
RB1P06400 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.82■□□□□ 0.92
RB1P06400 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RB1P06400 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RB1P06400 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RB1P06400 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.82■□□□□ 0.92
RB1P06400 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.82■□□□□ 0.92
RB1P06400 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RB1P06400 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RB1P06400 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.82■□□□□ 0.92
RB1P06400 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.82■□□□□ 0.92
RB1P06400 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RB1P06400 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.82■□□□□ 0.92
RB1P06400 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RB1P06400 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RB1P06400 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.81■□□□□ 0.92
RB1P06400 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RB1P06400 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.81■□□□□ 0.92
RB1P06400 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
RB1P06400 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.81■□□□□ 0.92
RB1P06400 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RB1P06400 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.81■□□□□ 0.92
RB1P06400 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.81■□□□□ 0.92
RB1P06400 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RB1P06400 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RB1P06400 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RB1P06400 AL671277.2-201ENST00000458060 996 ntBASIC20.81■□□□□ 0.92
RB1P06400 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.81■□□□□ 0.92
RB1P06400 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.81■□□□□ 0.92
RB1P06400 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RB1P06400 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.81■□□□□ 0.92
RB1P06400 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.81■□□□□ 0.92
RB1P06400 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RB1P06400 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RB1P06400 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.81■□□□□ 0.92
RB1P06400 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RB1P06400 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.8■□□□□ 0.92
RB1P06400 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.8■□□□□ 0.92
RB1P06400 TMEM179-206ENST00000616017 1645 ntBASIC20.8■□□□□ 0.92
RB1P06400 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.8■□□□□ 0.92
RB1P06400 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.8■□□□□ 0.92
RB1P06400 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.8■□□□□ 0.92
RB1P06400 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.8■□□□□ 0.92
RB1P06400 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.8■□□□□ 0.92
RB1P06400 AC008622.2-201ENST00000617006 1229 ntBASIC20.8■□□□□ 0.92
RB1P06400 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
RB1P06400 AC116407.4-201ENST00000623319 1061 ntBASIC20.8■□□□□ 0.92
RB1P06400 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RB1P06400 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RB1P06400 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RB1P06400 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms