Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 AL032819.2-201ENST00000624543 2162 ntBASIC17.62■□□□□ 0.41
HLA-DPB1P04440 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 AL138781.2-201ENST00000617896 1843 ntBASIC17.62■□□□□ 0.41
HLA-DPB1P04440 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.62■□□□□ 0.41
HLA-DPB1P04440 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 AC009237.14-201ENST00000609975 1594 ntBASIC17.62■□□□□ 0.41
HLA-DPB1P04440 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 AC013268.1-206ENST00000638368 961 ntBASIC17.61■□□□□ 0.41
HLA-DPB1P04440 AC112229.1-201ENST00000639295 961 ntBASIC17.61■□□□□ 0.41
HLA-DPB1P04440 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DPB1P04440 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 FAM21FP-204ENST00000608637 956 ntBASIC17.6■□□□□ 0.41
HLA-DPB1P04440 AC080038.1-201ENST00000611274 1154 ntBASIC17.6■□□□□ 0.41
HLA-DPB1P04440 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DPB1P04440 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 AC026471.1-201ENST00000564629 3026 ntBASIC17.59■□□□□ 0.41
HLA-DPB1P04440 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 CNN2P6-201ENST00000439038 900 ntBASIC17.59■□□□□ 0.41
HLA-DPB1P04440 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DPB1P04440 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms