Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.4■□□□□ 0.22
GAPDHP04406 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 AL138781.2-201ENST00000617896 1843 ntBASIC16.4■□□□□ 0.22
GAPDHP04406 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GAPDHP04406 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.4■□□□□ 0.22
GAPDHP04406 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
GAPDHP04406 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GAPDHP04406 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GAPDHP04406 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GAPDHP04406 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.4■□□□□ 0.22
GAPDHP04406 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.4■□□□□ 0.22
GAPDHP04406 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GAPDHP04406 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.4■□□□□ 0.22
GAPDHP04406 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.4■□□□□ 0.22
GAPDHP04406 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.4■□□□□ 0.22
GAPDHP04406 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.4■□□□□ 0.22
GAPDHP04406 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.4■□□□□ 0.22
GAPDHP04406 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.4■□□□□ 0.22
GAPDHP04406 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.4■□□□□ 0.22
GAPDHP04406 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GAPDHP04406 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.4■□□□□ 0.22
GAPDHP04406 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GAPDHP04406 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
GAPDHP04406 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.39■□□□□ 0.21
GAPDHP04406 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
GAPDHP04406 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
GAPDHP04406 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GAPDHP04406 SLC29A4P1-201ENST00000398760 971 ntBASIC16.39■□□□□ 0.21
GAPDHP04406 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.39■□□□□ 0.21
GAPDHP04406 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.39■□□□□ 0.21
GAPDHP04406 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.39■□□□□ 0.21
GAPDHP04406 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.39■□□□□ 0.21
GAPDHP04406 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.39■□□□□ 0.21
GAPDHP04406 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 AC079598.2-202ENST00000546624 1451 ntBASIC16.39■□□□□ 0.21
GAPDHP04406 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GAPDHP04406 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.39■□□□□ 0.21
GAPDHP04406 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
GAPDHP04406 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GAPDHP04406 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.38■□□□□ 0.21
GAPDHP04406 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.38■□□□□ 0.21
GAPDHP04406 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 GPX1P1-201ENST00000388829 606 ntBASIC16.38■□□□□ 0.21
GAPDHP04406 NCF1B-203ENST00000435988 1254 ntBASIC16.38■□□□□ 0.21
GAPDHP04406 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.38■□□□□ 0.21
GAPDHP04406 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.38■□□□□ 0.21
GAPDHP04406 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GAPDHP04406 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.38■□□□□ 0.21
GAPDHP04406 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.38■□□□□ 0.21
GAPDHP04406 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.38■□□□□ 0.21
GAPDHP04406 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms