Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-2O95096 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-2O95096 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NKX2-2O95096 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NKX2-2O95096 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.15■□□□□ 0.5
NKX2-2O95096 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-2O95096 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NKX2-2O95096 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-2O95096 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-2O95096 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
NKX2-2O95096 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.14■□□□□ 0.5
NKX2-2O95096 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-2O95096 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-2O95096 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NKX2-2O95096 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.14■□□□□ 0.49
NKX2-2O95096 KRT17P3-201ENST00000420566 1262 ntBASIC18.14■□□□□ 0.49
NKX2-2O95096 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.14■□□□□ 0.49
NKX2-2O95096 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-2O95096 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.14■□□□□ 0.49
NKX2-2O95096 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-2O95096 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-2O95096 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.14■□□□□ 0.49
NKX2-2O95096 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-2O95096 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.14■□□□□ 0.49
NKX2-2O95096 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-2O95096 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-2O95096 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.14■□□□□ 0.49
NKX2-2O95096 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.14■□□□□ 0.49
NKX2-2O95096 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.14■□□□□ 0.49
NKX2-2O95096 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NKX2-2O95096 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.13■□□□□ 0.49
NKX2-2O95096 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-2O95096 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-2O95096 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
NKX2-2O95096 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-2O95096 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-2O95096 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NKX2-2O95096 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-2O95096 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-2O95096 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.13■□□□□ 0.49
NKX2-2O95096 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-2O95096 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.13■□□□□ 0.49
NKX2-2O95096 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-2O95096 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NKX2-2O95096 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NKX2-2O95096 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.13■□□□□ 0.49
NKX2-2O95096 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NKX2-2O95096 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.13■□□□□ 0.49
NKX2-2O95096 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-2O95096 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.13■□□□□ 0.49
NKX2-2O95096 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.13■□□□□ 0.49
NKX2-2O95096 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NKX2-2O95096 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-2O95096 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
NKX2-2O95096 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NKX2-2O95096 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-2O95096 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
NKX2-2O95096 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-2O95096 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NKX2-2O95096 ESRRAP1-201ENST00000400596 1257 ntBASIC18.12■□□□□ 0.49
NKX2-2O95096 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.12■□□□□ 0.49
NKX2-2O95096 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
NKX2-2O95096 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.12■□□□□ 0.49
NKX2-2O95096 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.12■□□□□ 0.49
NKX2-2O95096 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.12■□□□□ 0.49
NKX2-2O95096 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-2O95096 AC069544.1-201ENST00000609399 999 ntBASIC18.12■□□□□ 0.49
NKX2-2O95096 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.12■□□□□ 0.49
NKX2-2O95096 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-2O95096 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-2O95096 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-2O95096 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-2O95096 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-2O95096 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-2O95096 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.12■□□□□ 0.49
NKX2-2O95096 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-2O95096 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
NKX2-2O95096 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-2O95096 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-2O95096 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX2-2O95096 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX2-2O95096 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.11■□□□□ 0.49
NKX2-2O95096 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 KRT18P16-201ENST00000510337 1294 ntBASIC18.11■□□□□ 0.49
NKX2-2O95096 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.11■□□□□ 0.49
NKX2-2O95096 PRKY-204ENST00000533551 1019 ntBASIC18.11■□□□□ 0.49
NKX2-2O95096 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.11■□□□□ 0.49
NKX2-2O95096 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX2-2O95096 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX2-2O95096 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms