Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNRNP200O75643 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRNP200O75643 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRNP200O75643 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP200O75643 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.82■□□□□ 0.6
SNRNP200O75643 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP200O75643 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP200O75643 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.82■□□□□ 0.6
SNRNP200O75643 MIR4497-201ENST00000583208 89 ntBASIC18.82■□□□□ 0.6
SNRNP200O75643 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.82■□□□□ 0.6
SNRNP200O75643 Z99916.2-201ENST00000604037 246 ntBASIC18.82■□□□□ 0.6
SNRNP200O75643 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP200O75643 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SNRNP200O75643 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP200O75643 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP200O75643 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.82■□□□□ 0.6
SNRNP200O75643 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP200O75643 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SNRNP200O75643 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP200O75643 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP200O75643 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SNRNP200O75643 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.82■□□□□ 0.6
SNRNP200O75643 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP200O75643 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNRNP200O75643 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP200O75643 AL596275.1-201ENST00000423464 877 ntBASIC18.82■□□□□ 0.6
SNRNP200O75643 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SNRNP200O75643 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.82■□□□□ 0.6
SNRNP200O75643 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.81■□□□□ 0.6
SNRNP200O75643 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.81■□□□□ 0.6
SNRNP200O75643 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP200O75643 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SNRNP200O75643 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP200O75643 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP200O75643 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP200O75643 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SNRNP200O75643 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.81■□□□□ 0.6
SNRNP200O75643 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.81■□□□□ 0.6
SNRNP200O75643 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.81■□□□□ 0.6
SNRNP200O75643 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP200O75643 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP200O75643 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP200O75643 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SNRNP200O75643 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP200O75643 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SNRNP200O75643 AL158211.5-201ENST00000623583 2518 ntBASIC18.81■□□□□ 0.6
SNRNP200O75643 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP200O75643 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP200O75643 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.8■□□□□ 0.6
SNRNP200O75643 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.8■□□□□ 0.6
SNRNP200O75643 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.8■□□□□ 0.6
SNRNP200O75643 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.8■□□□□ 0.6
SNRNP200O75643 AC113410.3-201ENST00000623366 203 ntBASIC18.8■□□□□ 0.6
SNRNP200O75643 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.8■□□□□ 0.6
SNRNP200O75643 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNRNP200O75643 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SNRNP200O75643 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.8■□□□□ 0.6
SNRNP200O75643 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SNRNP200O75643 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.8■□□□□ 0.6
SNRNP200O75643 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.8■□□□□ 0.6
SNRNP200O75643 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.8■□□□□ 0.6
SNRNP200O75643 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.8■□□□□ 0.6
SNRNP200O75643 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.8■□□□□ 0.6
SNRNP200O75643 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.8■□□□□ 0.6
SNRNP200O75643 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP200O75643 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.8■□□□□ 0.6
SNRNP200O75643 Z82202.1-201ENST00000623446 1880 ntBASIC18.8■□□□□ 0.6
SNRNP200O75643 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.8■□□□□ 0.6
SNRNP200O75643 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SNRNP200O75643 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 AC009237.14-201ENST00000609975 1594 ntBASIC18.79■□□□□ 0.6
SNRNP200O75643 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.79■□□□□ 0.6
SNRNP200O75643 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.79■□□□□ 0.6
SNRNP200O75643 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNRNP200O75643 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SNRNP200O75643 AL135905.2-201ENST00000584934 1404 ntBASIC18.79■□□□□ 0.6
SNRNP200O75643 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.79■□□□□ 0.6
SNRNP200O75643 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.79■□□□□ 0.6
SNRNP200O75643 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.79■□□□□ 0.6
SNRNP200O75643 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.79■□□□□ 0.6
SNRNP200O75643 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.79■□□□□ 0.6
SNRNP200O75643 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP200O75643 TSPY7P-201ENST00000431358 1114 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms