Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
CLDN11O75508 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN11O75508 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN11O75508 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN11O75508 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CLDN11O75508 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CLDN11O75508 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN11O75508 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN11O75508 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN11O75508 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN11O75508 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN11O75508 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN11O75508 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN11O75508 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN11O75508 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN11O75508 AP002982.1-201ENST00000492365 877 ntBASIC20.1■□□□□ 0.81
CLDN11O75508 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CLDN11O75508 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.1■□□□□ 0.81
CLDN11O75508 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN11O75508 AL049637.2-201ENST00000641778 930 ntBASIC20.1■□□□□ 0.81
CLDN11O75508 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.1■□□□□ 0.81
CLDN11O75508 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN11O75508 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN11O75508 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CLDN11O75508 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CLDN11O75508 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN11O75508 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.1■□□□□ 0.81
CLDN11O75508 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN11O75508 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
CLDN11O75508 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN11O75508 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
CLDN11O75508 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
CLDN11O75508 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN11O75508 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN11O75508 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN11O75508 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CLDN11O75508 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.09■□□□□ 0.81
CLDN11O75508 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN11O75508 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.09■□□□□ 0.81
CLDN11O75508 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN11O75508 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN11O75508 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN11O75508 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN11O75508 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN11O75508 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN11O75508 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CLDN11O75508 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN11O75508 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CLDN11O75508 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN11O75508 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN11O75508 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CLDN11O75508 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN11O75508 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.08■□□□□ 0.81
CLDN11O75508 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN11O75508 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.08■□□□□ 0.81
CLDN11O75508 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN11O75508 AC073195.1-201ENST00000607241 877 ntBASIC20.08■□□□□ 0.81
CLDN11O75508 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.08■□□□□ 0.8
CLDN11O75508 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.08■□□□□ 0.8
CLDN11O75508 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN11O75508 KRT8P8-201ENST00000434750 1448 ntBASIC20.08■□□□□ 0.8
CLDN11O75508 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN11O75508 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN11O75508 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CLDN11O75508 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN11O75508 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLDN11O75508 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CLDN11O75508 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CLDN11O75508 NIFKP9-201ENST00000419265 221 ntBASIC20.07■□□□□ 0.8
CLDN11O75508 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.07■□□□□ 0.8
CLDN11O75508 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN11O75508 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN11O75508 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN11O75508 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN11O75508 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN11O75508 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLDN11O75508 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
CLDN11O75508 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN11O75508 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN11O75508 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLDN11O75508 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CLDN11O75508 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN11O75508 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms