Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE3O75131 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE3O75131 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.82■□□□□ 0.6
CPNE3O75131 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CPNE3O75131 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CPNE3O75131 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CPNE3O75131 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE3O75131 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE3O75131 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CPNE3O75131 AC092720.2-201ENST00000602388 1665 ntBASIC18.82■□□□□ 0.6
CPNE3O75131 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CPNE3O75131 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE3O75131 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE3O75131 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE3O75131 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE3O75131 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.81■□□□□ 0.6
CPNE3O75131 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
CPNE3O75131 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.81■□□□□ 0.6
CPNE3O75131 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE3O75131 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE3O75131 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.81■□□□□ 0.6
CPNE3O75131 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.81■□□□□ 0.6
CPNE3O75131 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE3O75131 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE3O75131 AC026471.5-201ENST00000615068 467 ntBASIC18.81■□□□□ 0.6
CPNE3O75131 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CPNE3O75131 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE3O75131 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE3O75131 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.81■□□□□ 0.6
CPNE3O75131 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE3O75131 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CPNE3O75131 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.81■□□□□ 0.6
CPNE3O75131 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE3O75131 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE3O75131 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE3O75131 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE3O75131 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE3O75131 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE3O75131 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CPNE3O75131 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CPNE3O75131 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CPNE3O75131 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.8■□□□□ 0.6
CPNE3O75131 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE3O75131 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CPNE3O75131 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE3O75131 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE3O75131 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.8■□□□□ 0.6
CPNE3O75131 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.8■□□□□ 0.6
CPNE3O75131 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.8■□□□□ 0.6
CPNE3O75131 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.8■□□□□ 0.6
CPNE3O75131 CD177P1-201ENST00000606252 935 ntBASIC18.8■□□□□ 0.6
CPNE3O75131 AC073195.1-201ENST00000607241 877 ntBASIC18.8■□□□□ 0.6
CPNE3O75131 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.8■□□□□ 0.6
CPNE3O75131 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CPNE3O75131 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE3O75131 KRT16P6-202ENST00000425692 1426 ntBASIC18.8■□□□□ 0.6
CPNE3O75131 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.8■□□□□ 0.6
CPNE3O75131 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.8■□□□□ 0.6
CPNE3O75131 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE3O75131 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CPNE3O75131 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE3O75131 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE3O75131 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.79■□□□□ 0.6
CPNE3O75131 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE3O75131 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CPNE3O75131 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE3O75131 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CPNE3O75131 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.79■□□□□ 0.6
CPNE3O75131 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE3O75131 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE3O75131 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CPNE3O75131 AL355355.2-201ENST00000442321 338 ntBASIC18.79■□□□□ 0.6
CPNE3O75131 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CPNE3O75131 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE3O75131 AP002982.1-201ENST00000492365 877 ntBASIC18.79■□□□□ 0.6
CPNE3O75131 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.79■□□□□ 0.6
CPNE3O75131 LINC01023-201ENST00000606054 436 ntBASIC18.79■□□□□ 0.6
CPNE3O75131 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.79■□□□□ 0.6
CPNE3O75131 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.79■□□□□ 0.6
CPNE3O75131 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE3O75131 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE3O75131 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.79■□□□□ 0.6
CPNE3O75131 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE3O75131 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CPNE3O75131 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CPNE3O75131 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CPNE3O75131 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE3O75131 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.78■□□□□ 0.6
CPNE3O75131 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE3O75131 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.78■□□□□ 0.6
CPNE3O75131 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE3O75131 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE3O75131 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE3O75131 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE3O75131 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CPNE3O75131 AC211429.1-201ENST00000415277 523 ntBASIC18.78■□□□□ 0.6
CPNE3O75131 ECEL1P3-201ENST00000427961 737 ntBASIC18.78■□□□□ 0.6
CPNE3O75131 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE3O75131 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE3O75131 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms