Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.56■□□□□ 0.56
URB1O60287 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.55■□□□□ 0.56
URB1O60287 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 AP000593.1-201ENST00000393668 712 ntBASIC18.55■□□□□ 0.56
URB1O60287 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.55■□□□□ 0.56
URB1O60287 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.55■□□□□ 0.56
URB1O60287 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
URB1O60287 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
URB1O60287 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.55■□□□□ 0.56
URB1O60287 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.55■□□□□ 0.56
URB1O60287 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
URB1O60287 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.54■□□□□ 0.56
URB1O60287 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
URB1O60287 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
URB1O60287 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.54■□□□□ 0.56
URB1O60287 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
URB1O60287 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
URB1O60287 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
URB1O60287 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
URB1O60287 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.54■□□□□ 0.56
URB1O60287 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.54■□□□□ 0.56
URB1O60287 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
URB1O60287 KRT8P36-201ENST00000489121 1440 ntBASIC18.54■□□□□ 0.56
URB1O60287 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.54■□□□□ 0.56
URB1O60287 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
URB1O60287 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
URB1O60287 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.54■□□□□ 0.56
URB1O60287 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.54■□□□□ 0.56
URB1O60287 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
URB1O60287 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
URB1O60287 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
URB1O60287 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.53■□□□□ 0.56
URB1O60287 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
URB1O60287 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.53■□□□□ 0.56
URB1O60287 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.53■□□□□ 0.56
URB1O60287 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.53■□□□□ 0.56
URB1O60287 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 AC120498.9-201ENST00000339021 3867 ntBASIC18.53■□□□□ 0.56
URB1O60287 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.53■□□□□ 0.56
URB1O60287 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.53■□□□□ 0.56
URB1O60287 AC006538.3-201ENST00000612495 578 ntBASIC18.53■□□□□ 0.56
URB1O60287 AC010653.2-201ENST00000623505 997 ntBASIC18.53■□□□□ 0.56
URB1O60287 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
URB1O60287 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
URB1O60287 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.53■□□□□ 0.56
URB1O60287 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.53■□□□□ 0.56
URB1O60287 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
URB1O60287 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
URB1O60287 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
URB1O60287 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
URB1O60287 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
URB1O60287 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.52■□□□□ 0.56
URB1O60287 TSPY21P-201ENST00000433481 731 ntBASIC18.52■□□□□ 0.56
URB1O60287 TSPY23P-201ENST00000440136 739 ntBASIC18.52■□□□□ 0.56
URB1O60287 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.52■□□□□ 0.56
URB1O60287 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
URB1O60287 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.52■□□□□ 0.56
URB1O60287 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.52■□□□□ 0.56
URB1O60287 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.52■□□□□ 0.56
URB1O60287 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
URB1O60287 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
URB1O60287 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
URB1O60287 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
URB1O60287 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
URB1O60287 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
URB1O60287 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
URB1O60287 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.52■□□□□ 0.55
URB1O60287 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.52■□□□□ 0.55
URB1O60287 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.52■□□□□ 0.55
URB1O60287 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.52■□□□□ 0.55
URB1O60287 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
URB1O60287 AC012313.10-201ENST00000623509 926 ntBASIC18.52■□□□□ 0.55
URB1O60287 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.52■□□□□ 0.55
URB1O60287 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
URB1O60287 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
URB1O60287 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms