Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.97■□□□□ 0.79
KDELR3O43731 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
KDELR3O43731 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.96■□□□□ 0.79
KDELR3O43731 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.96■□□□□ 0.79
KDELR3O43731 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.96■□□□□ 0.79
KDELR3O43731 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 AC066615.1-201ENST00000640911 628 ntBASIC19.96■□□□□ 0.79
KDELR3O43731 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.96■□□□□ 0.79
KDELR3O43731 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
KDELR3O43731 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.96■□□□□ 0.79
KDELR3O43731 HTR7P1-201ENST00000538670 1336 ntBASIC19.96■□□□□ 0.79
KDELR3O43731 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KDELR3O43731 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.96■□□□□ 0.79
KDELR3O43731 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.95■□□□□ 0.78
KDELR3O43731 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.95■□□□□ 0.78
KDELR3O43731 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KDELR3O43731 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
KDELR3O43731 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.95■□□□□ 0.78
KDELR3O43731 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 AC008550.1-201ENST00000511500 884 ntBASIC19.95■□□□□ 0.78
KDELR3O43731 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.95■□□□□ 0.78
KDELR3O43731 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KDELR3O43731 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 PCDHAC2-203ENST00000615316 3011 ntBASIC19.95■□□□□ 0.78
KDELR3O43731 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KDELR3O43731 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.95■□□□□ 0.78
KDELR3O43731 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDELR3O43731 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.95■□□□□ 0.78
KDELR3O43731 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDELR3O43731 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
KDELR3O43731 KRT8P8-201ENST00000434750 1448 ntBASIC19.94■□□□□ 0.78
KDELR3O43731 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDELR3O43731 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
KDELR3O43731 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDELR3O43731 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDELR3O43731 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDELR3O43731 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.94■□□□□ 0.78
KDELR3O43731 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KDELR3O43731 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDELR3O43731 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDELR3O43731 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
KDELR3O43731 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.94■□□□□ 0.78
KDELR3O43731 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.94■□□□□ 0.78
KDELR3O43731 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.94■□□□□ 0.78
KDELR3O43731 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.94■□□□□ 0.78
KDELR3O43731 C1QL1P1-201ENST00000568105 661 ntBASIC19.94■□□□□ 0.78
KDELR3O43731 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.94■□□□□ 0.78
KDELR3O43731 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KDELR3O43731 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KDELR3O43731 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.94■□□□□ 0.78
KDELR3O43731 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDELR3O43731 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
KDELR3O43731 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.93■□□□□ 0.78
KDELR3O43731 AL135905.2-201ENST00000584934 1404 ntBASIC19.93■□□□□ 0.78
KDELR3O43731 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDELR3O43731 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.93■□□□□ 0.78
KDELR3O43731 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
KDELR3O43731 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.93■□□□□ 0.78
KDELR3O43731 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
KDELR3O43731 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDELR3O43731 RPS2P55-201ENST00000397318 883 ntBASIC19.93■□□□□ 0.78
KDELR3O43731 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDELR3O43731 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.93■□□□□ 0.78
KDELR3O43731 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDELR3O43731 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.93■□□□□ 0.78
KDELR3O43731 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDELR3O43731 AC107956.1-201ENST00000494359 873 ntBASIC19.93■□□□□ 0.78
KDELR3O43731 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.93■□□□□ 0.78
KDELR3O43731 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDELR3O43731 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.93■□□□□ 0.78
KDELR3O43731 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDELR3O43731 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms