Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HTRA2O43464 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HTRA2O43464 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HTRA2O43464 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HTRA2O43464 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
HTRA2O43464 AL158047.1-201ENST00000445918 881 ntBASIC19.83■□□□□ 0.77
HTRA2O43464 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.83■□□□□ 0.77
HTRA2O43464 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
HTRA2O43464 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.83■□□□□ 0.77
HTRA2O43464 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HTRA2O43464 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HTRA2O43464 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.83■□□□□ 0.76
HTRA2O43464 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HTRA2O43464 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HTRA2O43464 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.83■□□□□ 0.76
HTRA2O43464 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HTRA2O43464 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HTRA2O43464 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.83■□□□□ 0.76
HTRA2O43464 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
HTRA2O43464 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HTRA2O43464 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 YBX1P10-201ENST00000444752 975 ntBASIC19.82■□□□□ 0.76
HTRA2O43464 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HTRA2O43464 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.82■□□□□ 0.76
HTRA2O43464 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTRA2O43464 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.82■□□□□ 0.76
HTRA2O43464 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HTRA2O43464 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTRA2O43464 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
HTRA2O43464 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTRA2O43464 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HTRA2O43464 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTRA2O43464 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTRA2O43464 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.81■□□□□ 0.76
HTRA2O43464 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.81■□□□□ 0.76
HTRA2O43464 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTRA2O43464 UBE2SP1-201ENST00000450587 669 ntBASIC19.81■□□□□ 0.76
HTRA2O43464 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.81■□□□□ 0.76
HTRA2O43464 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HTRA2O43464 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.81■□□□□ 0.76
HTRA2O43464 FAM197Y4-202ENST00000622692 608 ntBASIC19.81■□□□□ 0.76
HTRA2O43464 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTRA2O43464 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.81■□□□□ 0.76
HTRA2O43464 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTRA2O43464 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTRA2O43464 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
HTRA2O43464 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTRA2O43464 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.8■□□□□ 0.76
HTRA2O43464 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.8■□□□□ 0.76
HTRA2O43464 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTRA2O43464 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTRA2O43464 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTRA2O43464 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HTRA2O43464 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTRA2O43464 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.8■□□□□ 0.76
HTRA2O43464 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HTRA2O43464 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTRA2O43464 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.8■□□□□ 0.76
HTRA2O43464 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.8■□□□□ 0.76
HTRA2O43464 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.8■□□□□ 0.76
HTRA2O43464 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.8■□□□□ 0.76
HTRA2O43464 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.8■□□□□ 0.76
HTRA2O43464 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.8■□□□□ 0.76
HTRA2O43464 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.8■□□□□ 0.76
HTRA2O43464 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.8■□□□□ 0.76
HTRA2O43464 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.8■□□□□ 0.76
HTRA2O43464 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.8■□□□□ 0.76
HTRA2O43464 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HTRA2O43464 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.8■□□□□ 0.76
HTRA2O43464 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.8■□□□□ 0.76
HTRA2O43464 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.8■□□□□ 0.76
HTRA2O43464 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HTRA2O43464 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HTRA2O43464 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HTRA2O43464 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HTRA2O43464 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTRA2O43464 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTRA2O43464 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HTRA2O43464 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.79■□□□□ 0.76
HTRA2O43464 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.79■□□□□ 0.76
HTRA2O43464 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTRA2O43464 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTRA2O43464 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HTRA2O43464 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTRA2O43464 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTRA2O43464 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HTRA2O43464 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HTRA2O43464 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms