Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.07■■□□□ 1.6
ABCC4O15439 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.07■■□□□ 1.6
ABCC4O15439 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
ABCC4O15439 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ABCC4O15439 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC25.06■■□□□ 1.6
ABCC4O15439 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
ABCC4O15439 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCC4O15439 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC25.06■■□□□ 1.6
ABCC4O15439 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC25.06■■□□□ 1.6
ABCC4O15439 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCC4O15439 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ABCC4O15439 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCC4O15439 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCC4O15439 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
ABCC4O15439 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCC4O15439 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.06■■□□□ 1.6
ABCC4O15439 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.06■■□□□ 1.6
ABCC4O15439 AL121829.2-201ENST00000620908 328 ntBASIC25.06■■□□□ 1.6
ABCC4O15439 AC097493.4-201ENST00000641197 219 ntBASIC25.06■■□□□ 1.6
ABCC4O15439 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCC4O15439 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.06■■□□□ 1.6
ABCC4O15439 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC25.06■■□□□ 1.6
ABCC4O15439 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCC4O15439 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
ABCC4O15439 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCC4O15439 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ABCC4O15439 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ABCC4O15439 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
ABCC4O15439 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ABCC4O15439 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.05■■□□□ 1.6
ABCC4O15439 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ABCC4O15439 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ABCC4O15439 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ABCC4O15439 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ABCC4O15439 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ABCC4O15439 AL121906.2-201ENST00000621597 723 ntBASIC25.05■■□□□ 1.6
ABCC4O15439 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ABCC4O15439 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ABCC4O15439 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ABCC4O15439 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
ABCC4O15439 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC25.04■■□□□ 1.6
ABCC4O15439 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ABCC4O15439 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ABCC4O15439 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ABCC4O15439 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25.04■■□□□ 1.6
ABCC4O15439 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC25.04■■□□□ 1.6
ABCC4O15439 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.04■■□□□ 1.6
ABCC4O15439 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.04■■□□□ 1.6
ABCC4O15439 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.04■■□□□ 1.6
ABCC4O15439 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.04■■□□□ 1.6
ABCC4O15439 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ABCC4O15439 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
ABCC4O15439 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ABCC4O15439 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.04■■□□□ 1.6
ABCC4O15439 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC25.03■■□□□ 1.6
ABCC4O15439 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
ABCC4O15439 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.03■■□□□ 1.6
ABCC4O15439 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.03■■□□□ 1.6
ABCC4O15439 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
ABCC4O15439 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 AC026471.5-201ENST00000615068 467 ntBASIC25.03■■□□□ 1.6
ABCC4O15439 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
ABCC4O15439 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ABCC4O15439 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ABCC4O15439 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC25.02■■□□□ 1.6
ABCC4O15439 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC25.02■■□□□ 1.6
ABCC4O15439 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ABCC4O15439 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
ABCC4O15439 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ABCC4O15439 TREX1-205ENST00000625293 1783 ntBASIC25.02■■□□□ 1.6
ABCC4O15439 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
ABCC4O15439 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ABCC4O15439 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ABCC4O15439 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC25.02■■□□□ 1.6
ABCC4O15439 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
ABCC4O15439 RCN1P1-201ENST00000400413 996 ntBASIC25.02■■□□□ 1.6
ABCC4O15439 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.02■■□□□ 1.6
ABCC4O15439 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
ABCC4O15439 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.02■■□□□ 1.6
ABCC4O15439 AF186192.3-201ENST00000583427 947 ntBASIC25.02■■□□□ 1.6
ABCC4O15439 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ABCC4O15439 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC25.02■■□□□ 1.6
ABCC4O15439 AL353708.3-201ENST00000610272 989 ntBASIC25.02■■□□□ 1.6
ABCC4O15439 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC25.02■■□□□ 1.6
ABCC4O15439 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ABCC4O15439 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
ABCC4O15439 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ABCC4O15439 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ABCC4O15439 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC25.02■■□□□ 1.6
ABCC4O15439 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms