Protein–RNA interactions for Protein: O15258

RER1, Protein RER1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RER1O15258 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.24■□□□□ 0.35
RER1O15258 TFP1-202ENST00000475455 1573 ntBASIC17.24■□□□□ 0.35
RER1O15258 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.24■□□□□ 0.35
RER1O15258 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RER1O15258 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RER1O15258 AL355802.2-201ENST00000402069 882 ntBASIC17.24■□□□□ 0.35
RER1O15258 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RER1O15258 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.24■□□□□ 0.35
RER1O15258 RPS2P52-201ENST00000469610 820 ntBASIC17.24■□□□□ 0.35
RER1O15258 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.24■□□□□ 0.35
RER1O15258 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.24■□□□□ 0.35
RER1O15258 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.24■□□□□ 0.35
RER1O15258 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.24■□□□□ 0.35
RER1O15258 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.24■□□□□ 0.35
RER1O15258 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.24■□□□□ 0.35
RER1O15258 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RER1O15258 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RER1O15258 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RER1O15258 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RER1O15258 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RER1O15258 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.24■□□□□ 0.35
RER1O15258 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RER1O15258 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RER1O15258 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RER1O15258 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RER1O15258 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RER1O15258 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.23■□□□□ 0.35
RER1O15258 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.23■□□□□ 0.35
RER1O15258 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.23■□□□□ 0.35
RER1O15258 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.23■□□□□ 0.35
RER1O15258 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.23■□□□□ 0.35
RER1O15258 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.23■□□□□ 0.35
RER1O15258 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RER1O15258 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RER1O15258 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.23■□□□□ 0.35
RER1O15258 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RER1O15258 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.23■□□□□ 0.35
RER1O15258 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RER1O15258 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.22■□□□□ 0.35
RER1O15258 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.22■□□□□ 0.35
RER1O15258 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.22■□□□□ 0.35
RER1O15258 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RER1O15258 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RER1O15258 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RER1O15258 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RER1O15258 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RER1O15258 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RER1O15258 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RER1O15258 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.22■□□□□ 0.35
RER1O15258 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RER1O15258 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.22■□□□□ 0.35
RER1O15258 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.22■□□□□ 0.35
RER1O15258 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.22■□□□□ 0.35
RER1O15258 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.22■□□□□ 0.35
RER1O15258 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.22■□□□□ 0.35
RER1O15258 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RER1O15258 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RER1O15258 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RER1O15258 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RER1O15258 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RER1O15258 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.22■□□□□ 0.35
RER1O15258 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RER1O15258 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RER1O15258 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.21■□□□□ 0.35
RER1O15258 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RER1O15258 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.21■□□□□ 0.35
RER1O15258 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RER1O15258 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RER1O15258 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RER1O15258 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RER1O15258 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.21■□□□□ 0.35
RER1O15258 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RER1O15258 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.21■□□□□ 0.35
RER1O15258 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.21■□□□□ 0.35
RER1O15258 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.21■□□□□ 0.35
RER1O15258 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.21■□□□□ 0.35
RER1O15258 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.21■□□□□ 0.35
RER1O15258 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.21■□□□□ 0.35
RER1O15258 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.21■□□□□ 0.35
RER1O15258 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.21■□□□□ 0.35
RER1O15258 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RER1O15258 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RER1O15258 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RER1O15258 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.21■□□□□ 0.35
RER1O15258 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RER1O15258 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.21■□□□□ 0.35
RER1O15258 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RER1O15258 AC005332.7-201ENST00000614046 2005 ntBASIC17.21■□□□□ 0.35
RER1O15258 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms