Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TO15178 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.11■□□□□ 0.49
TO15178 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TO15178 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.11■□□□□ 0.49
TO15178 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TO15178 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TO15178 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TO15178 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TO15178 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TO15178 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TO15178 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.11■□□□□ 0.49
TO15178 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TO15178 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.11■□□□□ 0.49
TO15178 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TO15178 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TO15178 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TO15178 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TO15178 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TO15178 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.1■□□□□ 0.49
TO15178 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TO15178 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TO15178 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.1■□□□□ 0.49
TO15178 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TO15178 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TO15178 KRASP1-201ENST00000407852 552 ntBASIC18.1■□□□□ 0.49
TO15178 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.1■□□□□ 0.49
TO15178 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.1■□□□□ 0.49
TO15178 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TO15178 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.1■□□□□ 0.49
TO15178 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.1■□□□□ 0.49
TO15178 AC110285.5-201ENST00000611501 352 ntBASIC18.1■□□□□ 0.49
TO15178 TMEM191A-211ENST00000637163 1067 ntBASIC18.1■□□□□ 0.49
TO15178 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TO15178 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.1■□□□□ 0.49
TO15178 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TO15178 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TO15178 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TO15178 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TO15178 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.09■□□□□ 0.49
TO15178 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.09■□□□□ 0.49
TO15178 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.09■□□□□ 0.49
TO15178 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TO15178 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.09■□□□□ 0.49
TO15178 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TO15178 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.09■□□□□ 0.49
TO15178 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.09■□□□□ 0.49
TO15178 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TO15178 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TO15178 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TO15178 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TO15178 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
TO15178 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TO15178 AC004264.1-201ENST00000608354 794 ntBASIC18.09■□□□□ 0.49
TO15178 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.09■□□□□ 0.49
TO15178 AL359736.2-201ENST00000621992 437 ntBASIC18.09■□□□□ 0.49
TO15178 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
TO15178 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TO15178 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TO15178 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TO15178 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TO15178 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TO15178 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TO15178 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
TO15178 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TO15178 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.08■□□□□ 0.49
TO15178 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
TO15178 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TO15178 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.08■□□□□ 0.49
TO15178 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TO15178 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.08■□□□□ 0.49
TO15178 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.08■□□□□ 0.49
TO15178 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TO15178 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TO15178 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TO15178 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.08■□□□□ 0.48
TO15178 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TO15178 GCSHP5-201ENST00000443090 522 ntBASIC18.08■□□□□ 0.48
TO15178 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.08■□□□□ 0.48
TO15178 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TO15178 AC098590.1-201ENST00000468126 897 ntBASIC18.08■□□□□ 0.48
TO15178 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.08■□□□□ 0.48
TO15178 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.08■□□□□ 0.48
TO15178 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TO15178 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TO15178 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TO15178 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.08■□□□□ 0.48
TO15178 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TO15178 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TO15178 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TO15178 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TO15178 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TO15178 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.07■□□□□ 0.48
TO15178 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.07■□□□□ 0.48
TO15178 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TO15178 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TO15178 TUBB8P6-201ENST00000436895 1288 ntBASIC18.07■□□□□ 0.48
TO15178 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TO15178 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TO15178 KRT16P5-201ENST00000455284 522 ntBASIC18.07■□□□□ 0.48
TO15178 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms