Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.62■□□□□ 0.57
CACNA1AO00555 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1AO00555 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1AO00555 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1AO00555 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1AO00555 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1AO00555 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CACNA1AO00555 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.62■□□□□ 0.57
CACNA1AO00555 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.62■□□□□ 0.57
CACNA1AO00555 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.62■□□□□ 0.57
CACNA1AO00555 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1AO00555 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.62■□□□□ 0.57
CACNA1AO00555 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.62■□□□□ 0.57
CACNA1AO00555 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.62■□□□□ 0.57
CACNA1AO00555 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.62■□□□□ 0.57
CACNA1AO00555 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CACNA1AO00555 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.62■□□□□ 0.57
CACNA1AO00555 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CACNA1AO00555 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1AO00555 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1AO00555 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CACNA1AO00555 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.61■□□□□ 0.57
CACNA1AO00555 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.61■□□□□ 0.57
CACNA1AO00555 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.61■□□□□ 0.57
CACNA1AO00555 AC004967.1-201ENST00000453589 447 ntBASIC18.61■□□□□ 0.57
CACNA1AO00555 SAPCD2P3-201ENST00000455031 850 ntBASIC18.61■□□□□ 0.57
CACNA1AO00555 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.61■□□□□ 0.57
CACNA1AO00555 CYMP-203ENST00000474680 1263 ntBASIC18.61■□□□□ 0.57
CACNA1AO00555 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.61■□□□□ 0.57
CACNA1AO00555 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.61■□□□□ 0.57
CACNA1AO00555 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CACNA1AO00555 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1AO00555 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1AO00555 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1AO00555 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1AO00555 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1AO00555 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CACNA1AO00555 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.61■□□□□ 0.57
CACNA1AO00555 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA1AO00555 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CACNA1AO00555 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
CACNA1AO00555 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA1AO00555 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.6■□□□□ 0.57
CACNA1AO00555 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.6■□□□□ 0.57
CACNA1AO00555 AC093525.10-201ENST00000625130 1569 ntBASIC18.6■□□□□ 0.57
CACNA1AO00555 AKR1C7P-201ENST00000305623 895 ntBASIC18.6■□□□□ 0.57
CACNA1AO00555 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA1AO00555 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.6■□□□□ 0.57
CACNA1AO00555 FOSL1P1-201ENST00000511041 816 ntBASIC18.6■□□□□ 0.57
CACNA1AO00555 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.6■□□□□ 0.57
CACNA1AO00555 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA1AO00555 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA1AO00555 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA1AO00555 HLA-V-201ENST00000429037 534 ntBASIC18.6■□□□□ 0.57
CACNA1AO00555 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.6■□□□□ 0.57
CACNA1AO00555 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.6■□□□□ 0.57
CACNA1AO00555 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.6■□□□□ 0.57
CACNA1AO00555 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.6■□□□□ 0.57
CACNA1AO00555 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CACNA1AO00555 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA1AO00555 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
CACNA1AO00555 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.6■□□□□ 0.57
CACNA1AO00555 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.59■□□□□ 0.57
CACNA1AO00555 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA1AO00555 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CACNA1AO00555 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA1AO00555 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.59■□□□□ 0.57
CACNA1AO00555 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.59■□□□□ 0.57
CACNA1AO00555 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA1AO00555 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.59■□□□□ 0.57
CACNA1AO00555 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA1AO00555 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.59■□□□□ 0.57
CACNA1AO00555 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.59■□□□□ 0.57
CACNA1AO00555 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.59■□□□□ 0.57
CACNA1AO00555 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.59■□□□□ 0.57
CACNA1AO00555 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.59■□□□□ 0.57
CACNA1AO00555 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA1AO00555 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA1AO00555 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA1AO00555 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CACNA1AO00555 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA1AO00555 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
CACNA1AO00555 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA1AO00555 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA1AO00555 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
CACNA1AO00555 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA1AO00555 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.58■□□□□ 0.57
CACNA1AO00555 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CACNA1AO00555 AC010327.4-202ENST00000591484 748 ntBASIC18.58■□□□□ 0.57
CACNA1AO00555 TP73-AS1-207ENST00000624167 988 ntBASIC18.58■□□□□ 0.57
CACNA1AO00555 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA1AO00555 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1AO00555 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1AO00555 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA1AO00555 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.58■□□□□ 0.56
CACNA1AO00555 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.58■□□□□ 0.56
CACNA1AO00555 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.58■□□□□ 0.56
CACNA1AO00555 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.58■□□□□ 0.56
CACNA1AO00555 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CACNA1AO00555 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms