Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UPK1AO00322 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UPK1AO00322 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK1AO00322 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.62■□□□□ 0.57
UPK1AO00322 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK1AO00322 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK1AO00322 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.62■□□□□ 0.57
UPK1AO00322 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.62■□□□□ 0.57
UPK1AO00322 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 AL138781.1-201ENST00000566567 1274 ntBASIC18.62■□□□□ 0.57
UPK1AO00322 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK1AO00322 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK1AO00322 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK1AO00322 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK1AO00322 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
UPK1AO00322 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1AO00322 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1AO00322 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1AO00322 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
UPK1AO00322 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1AO00322 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1AO00322 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1AO00322 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.61■□□□□ 0.57
UPK1AO00322 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1AO00322 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.61■□□□□ 0.57
UPK1AO00322 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.61■□□□□ 0.57
UPK1AO00322 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1AO00322 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.61■□□□□ 0.57
UPK1AO00322 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.61■□□□□ 0.57
UPK1AO00322 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.61■□□□□ 0.57
UPK1AO00322 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.61■□□□□ 0.57
UPK1AO00322 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.61■□□□□ 0.57
UPK1AO00322 AC104771.1-201ENST00000603335 964 ntBASIC18.61■□□□□ 0.57
UPK1AO00322 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
UPK1AO00322 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1AO00322 MYC-209ENST00000641252 345 ntBASIC18.61■□□□□ 0.57
UPK1AO00322 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.61■□□□□ 0.57
UPK1AO00322 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1AO00322 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1AO00322 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1AO00322 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
UPK1AO00322 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.6■□□□□ 0.57
UPK1AO00322 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.6■□□□□ 0.57
UPK1AO00322 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
UPK1AO00322 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
UPK1AO00322 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UPK1AO00322 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.6■□□□□ 0.57
UPK1AO00322 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.6■□□□□ 0.57
UPK1AO00322 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.6■□□□□ 0.57
UPK1AO00322 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.6■□□□□ 0.57
UPK1AO00322 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
UPK1AO00322 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
UPK1AO00322 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.6■□□□□ 0.57
UPK1AO00322 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UPK1AO00322 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UPK1AO00322 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UPK1AO00322 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1AO00322 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1AO00322 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1AO00322 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.59■□□□□ 0.57
UPK1AO00322 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UPK1AO00322 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.59■□□□□ 0.57
UPK1AO00322 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.59■□□□□ 0.57
UPK1AO00322 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1AO00322 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.59■□□□□ 0.57
UPK1AO00322 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
UPK1AO00322 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
UPK1AO00322 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UPK1AO00322 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1AO00322 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.59■□□□□ 0.57
UPK1AO00322 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.59■□□□□ 0.57
UPK1AO00322 AC098934.4-201ENST00000564127 592 ntBASIC18.59■□□□□ 0.57
UPK1AO00322 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
UPK1AO00322 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.59■□□□□ 0.57
UPK1AO00322 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1AO00322 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.59■□□□□ 0.57
UPK1AO00322 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.59■□□□□ 0.57
UPK1AO00322 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1AO00322 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.59■□□□□ 0.57
UPK1AO00322 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
UPK1AO00322 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms