Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 AL162412.1-201ENST00000567129 965 ntBASIC18.15■□□□□ 0.5
TNFRSF11BO00300 KRT18P61-201ENST00000585825 1298 ntBASIC18.15■□□□□ 0.5
TNFRSF11BO00300 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 NEFHP1-201ENST00000412845 2629 ntBASIC18.15■□□□□ 0.5
TNFRSF11BO00300 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.14■□□□□ 0.5
TNFRSF11BO00300 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TNFRSF11BO00300 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
TNFRSF11BO00300 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TNFRSF11BO00300 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 PHGDH-210ENST00000641115 1638 ntBASIC18.14■□□□□ 0.49
TNFRSF11BO00300 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF11BO00300 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 MCRIP2P1-201ENST00000394346 511 ntBASIC18.13■□□□□ 0.49
TNFRSF11BO00300 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.13■□□□□ 0.49
TNFRSF11BO00300 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFRSF11BO00300 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF11BO00300 AL138781.2-201ENST00000617896 1843 ntBASIC18.12■□□□□ 0.49
TNFRSF11BO00300 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 AC007322.4-201ENST00000509611 723 ntBASIC18.11■□□□□ 0.49
TNFRSF11BO00300 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 MFSD11-216ENST00000590393 1141 ntBASIC18.11■□□□□ 0.49
TNFRSF11BO00300 AC100791.3-201ENST00000617619 330 ntBASIC18.11■□□□□ 0.49
TNFRSF11BO00300 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms