Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TLR4O00206 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TLR4O00206 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.46■□□□□ 0.71
TLR4O00206 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.46■□□□□ 0.71
TLR4O00206 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TLR4O00206 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TLR4O00206 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TLR4O00206 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.46■□□□□ 0.71
TLR4O00206 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TLR4O00206 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TLR4O00206 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.46■□□□□ 0.71
TLR4O00206 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TLR4O00206 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.46■□□□□ 0.71
TLR4O00206 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.46■□□□□ 0.71
TLR4O00206 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TLR4O00206 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TLR4O00206 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.46■□□□□ 0.71
TLR4O00206 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TLR4O00206 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.46■□□□□ 0.71
TLR4O00206 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.46■□□□□ 0.71
TLR4O00206 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TLR4O00206 CYP2D8P-201ENST00000433633 1490 ntBASIC19.46■□□□□ 0.71
TLR4O00206 AC018553.1-201ENST00000616682 1458 ntBASIC19.46■□□□□ 0.71
TLR4O00206 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TLR4O00206 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TLR4O00206 AC092720.2-201ENST00000602388 1665 ntBASIC19.46■□□□□ 0.71
TLR4O00206 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TLR4O00206 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.46■□□□□ 0.71
TLR4O00206 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.45■□□□□ 0.7
TLR4O00206 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TLR4O00206 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TLR4O00206 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TLR4O00206 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.45■□□□□ 0.7
TLR4O00206 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.45■□□□□ 0.7
TLR4O00206 YBX1P10-201ENST00000444752 975 ntBASIC19.45■□□□□ 0.7
TLR4O00206 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.45■□□□□ 0.7
TLR4O00206 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.45■□□□□ 0.7
TLR4O00206 AL445675.2-201ENST00000620291 557 ntBASIC19.45■□□□□ 0.7
TLR4O00206 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TLR4O00206 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TLR4O00206 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TLR4O00206 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TLR4O00206 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.45■□□□□ 0.7
TLR4O00206 KRT18P22-201ENST00000402024 1347 ntBASIC19.45■□□□□ 0.7
TLR4O00206 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TLR4O00206 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TLR4O00206 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.44■□□□□ 0.7
TLR4O00206 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TLR4O00206 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TLR4O00206 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.44■□□□□ 0.7
TLR4O00206 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.44■□□□□ 0.7
TLR4O00206 FSCN1P1-201ENST00000568912 1481 ntBASIC19.44■□□□□ 0.7
TLR4O00206 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 AC005521.1-201ENST00000393351 872 ntBASIC19.44■□□□□ 0.7
TLR4O00206 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.44■□□□□ 0.7
TLR4O00206 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.44■□□□□ 0.7
TLR4O00206 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.44■□□□□ 0.7
TLR4O00206 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.44■□□□□ 0.7
TLR4O00206 AC010947.1-201ENST00000623454 693 ntBASIC19.44■□□□□ 0.7
TLR4O00206 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TLR4O00206 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.44■□□□□ 0.7
TLR4O00206 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TLR4O00206 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR4O00206 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TLR4O00206 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.44■□□□□ 0.7
TLR4O00206 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR4O00206 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR4O00206 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TLR4O00206 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TLR4O00206 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
TLR4O00206 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR4O00206 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR4O00206 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR4O00206 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.43■□□□□ 0.7
TLR4O00206 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TLR4O00206 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR4O00206 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR4O00206 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TLR4O00206 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TLR4O00206 AC026271.3-201ENST00000571884 352 ntBASIC19.43■□□□□ 0.7
TLR4O00206 AL445228.2-201ENST00000605589 952 ntBASIC19.43■□□□□ 0.7
TLR4O00206 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.43■□□□□ 0.7
TLR4O00206 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR4O00206 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TLR4O00206 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TLR4O00206 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TLR4O00206 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR4O00206 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms