Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.84■□□□□ 0.77
AP3B1O00203 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3B1O00203 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
AP3B1O00203 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
AP3B1O00203 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3B1O00203 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.84■□□□□ 0.77
AP3B1O00203 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.84■□□□□ 0.77
AP3B1O00203 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.84■□□□□ 0.77
AP3B1O00203 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.84■□□□□ 0.77
AP3B1O00203 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.84■□□□□ 0.77
AP3B1O00203 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.84■□□□□ 0.77
AP3B1O00203 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.84■□□□□ 0.77
AP3B1O00203 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
AP3B1O00203 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3B1O00203 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3B1O00203 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.84■□□□□ 0.77
AP3B1O00203 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3B1O00203 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.83■□□□□ 0.77
AP3B1O00203 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3B1O00203 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
AP3B1O00203 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3B1O00203 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3B1O00203 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
AP3B1O00203 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3B1O00203 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.83■□□□□ 0.77
AP3B1O00203 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
AP3B1O00203 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.83■□□□□ 0.77
AP3B1O00203 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3B1O00203 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
AP3B1O00203 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
AP3B1O00203 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP3B1O00203 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
AP3B1O00203 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.83■□□□□ 0.76
AP3B1O00203 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
AP3B1O00203 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
AP3B1O00203 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP3B1O00203 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
AP3B1O00203 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3B1O00203 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3B1O00203 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.82■□□□□ 0.76
AP3B1O00203 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3B1O00203 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP3B1O00203 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.82■□□□□ 0.76
AP3B1O00203 GUSBP6-202ENST00000438529 1198 ntBASIC19.82■□□□□ 0.76
AP3B1O00203 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.82■□□□□ 0.76
AP3B1O00203 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
AP3B1O00203 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.82■□□□□ 0.76
AP3B1O00203 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP3B1O00203 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.82■□□□□ 0.76
AP3B1O00203 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP3B1O00203 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.82■□□□□ 0.76
AP3B1O00203 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3B1O00203 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP3B1O00203 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3B1O00203 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3B1O00203 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3B1O00203 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
AP3B1O00203 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP3B1O00203 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP3B1O00203 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
AP3B1O00203 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.81■□□□□ 0.76
AP3B1O00203 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.81■□□□□ 0.76
AP3B1O00203 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.81■□□□□ 0.76
AP3B1O00203 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.81■□□□□ 0.76
AP3B1O00203 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.81■□□□□ 0.76
AP3B1O00203 MYC-209ENST00000641252 345 ntBASIC19.81■□□□□ 0.76
AP3B1O00203 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3B1O00203 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3B1O00203 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.81■□□□□ 0.76
AP3B1O00203 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
AP3B1O00203 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.81■□□□□ 0.76
AP3B1O00203 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3B1O00203 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AP3B1O00203 AC092368.3-202ENST00000574180 1591 ntBASIC19.8■□□□□ 0.76
AP3B1O00203 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
AP3B1O00203 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3B1O00203 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.8■□□□□ 0.76
AP3B1O00203 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.8■□□□□ 0.76
AP3B1O00203 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.8■□□□□ 0.76
AP3B1O00203 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3B1O00203 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.8■□□□□ 0.76
AP3B1O00203 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.8■□□□□ 0.76
AP3B1O00203 AC060766.5-201ENST00000590539 871 ntBASIC19.8■□□□□ 0.76
AP3B1O00203 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.8■□□□□ 0.76
AP3B1O00203 AL121906.2-201ENST00000621597 723 ntBASIC19.8■□□□□ 0.76
AP3B1O00203 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3B1O00203 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3B1O00203 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3B1O00203 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3B1O00203 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
AP3B1O00203 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AP3B1O00203 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
AP3B1O00203 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.79■□□□□ 0.76
AP3B1O00203 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.79■□□□□ 0.76
AP3B1O00203 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
AP3B1O00203 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP3B1O00203 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3B1O00203 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.79■□□□□ 0.76
AP3B1O00203 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3B1O00203 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms