Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.17■□□□□ 0.98
CCDC66A2RUB6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.16■□□□□ 0.98
CCDC66A2RUB6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 PGM5P4-201ENST00000421970 445 ntBASIC21.16■□□□□ 0.98
CCDC66A2RUB6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 UBE2DNL-204ENST00000602536 740 ntBASIC21.16■□□□□ 0.98
CCDC66A2RUB6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC66A2RUB6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 AL133373.2-201ENST00000623187 2828 ntBASIC21.15■□□□□ 0.98
CCDC66A2RUB6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 KRT18P61-201ENST00000585825 1298 ntBASIC21.15■□□□□ 0.98
CCDC66A2RUB6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 MYCNOS-205ENST00000641950 531 ntBASIC21.15■□□□□ 0.98
CCDC66A2RUB6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC66A2RUB6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC66A2RUB6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CCDC66A2RUB6 BX119927.1-201ENST00000636596 1552 ntBASIC21.14■□□□□ 0.98
CCDC66A2RUB6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC66A2RUB6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC66A2RUB6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CCDC66A2RUB6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC66A2RUB6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC66A2RUB6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
CCDC66A2RUB6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC66A2RUB6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC66A2RUB6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 AC125437.2-201ENST00000625180 2167 ntBASIC21.13■□□□□ 0.97
CCDC66A2RUB6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC66A2RUB6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms