Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
A0A1W2PRF3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
A0A1W2PRF3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
A0A1W2PRF3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 RPS2P4-201ENST00000476944 856 ntBASIC16.13■□□□□ 0.17
A0A1W2PRF3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 AC008550.1-201ENST00000511500 884 ntBASIC16.13■□□□□ 0.17
A0A1W2PRF3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
A0A1W2PRF3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 AC110285.5-201ENST00000611501 352 ntBASIC16.13■□□□□ 0.17
A0A1W2PRF3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
A0A1W2PRF3 AL121829.2-201ENST00000620908 328 ntBASIC16.13■□□□□ 0.17
A0A1W2PRF3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 NBPF21P-201ENST00000425093 1451 ntBASIC16.13■□□□□ 0.17
A0A1W2PRF3 GABARAPL3-202ENST00000624044 1851 ntBASIC16.13■□□□□ 0.17
A0A1W2PRF3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
A0A1W2PRF3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
A0A1W2PRF3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
A0A1W2PRF3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
A0A1W2PRF3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
A0A1W2PRF3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 BX119927.1-201ENST00000636596 1552 ntBASIC16.12■□□□□ 0.17
A0A1W2PRF3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
A0A1W2PRF3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
A0A1W2PRF3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.11■□□□□ 0.17
A0A1W2PRF3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
A0A1W2PRF3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 AC018553.1-201ENST00000616682 1458 ntBASIC16.1■□□□□ 0.17
A0A1W2PRF3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms