Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC196A0A1B0GTZ2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC196A0A1B0GTZ2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC196A0A1B0GTZ2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.86■■□□□ 1.25
CCDC196A0A1B0GTZ2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.86■■□□□ 1.25
CCDC196A0A1B0GTZ2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC196A0A1B0GTZ2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CCDC196A0A1B0GTZ2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
CCDC196A0A1B0GTZ2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 AC006058.3-201ENST00000606217 1069 ntBASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.85■■□□□ 1.25
CCDC196A0A1B0GTZ2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 TREX1-205ENST00000625293 1783 ntBASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 FAM201B-201ENST00000458407 597 ntBASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC196A0A1B0GTZ2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.83■■□□□ 1.25
CCDC196A0A1B0GTZ2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
CCDC196A0A1B0GTZ2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.24
CCDC196A0A1B0GTZ2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
CCDC196A0A1B0GTZ2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 AC233263.1-201ENST00000578059 224 ntBASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 AC073648.6-201ENST00000641589 218 ntBASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.82■■□□□ 1.24
CCDC196A0A1B0GTZ2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 AC128676.1-201ENST00000454392 318 ntBASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms