Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV4-28A0A0C4DH34 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 HCG11-201ENST00000411553 5696 ntBASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
IGHV4-28A0A0C4DH34 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 AL391422.3-201ENST00000603791 2761 ntBASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 AL049637.2-201ENST00000641778 930 ntBASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 LINC01006-201ENST00000333319 2292 ntBASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.17□□□□□ -0.14
IGHV4-28A0A0C4DH34 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 AL157384.1-201ENST00000445995 2473 ntBASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 AL353807.1-201ENST00000427475 662 ntBASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 YBX1P10-201ENST00000444752 975 ntBASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 AP002982.1-201ENST00000492365 877 ntBASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms