Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 AC092437.1-201ENST00000624794 1048 ntBASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 AC009237.14-201ENST00000609975 1594 ntBASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-3A0A0B4J271 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 AC105036.2-201ENST00000569468 176 ntBASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 AC133552.2-202ENST00000575694 574 ntBASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 MKRN4P-201ENST00000444706 1521 ntBASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 AC087289.5-201ENST00000586076 3175 ntBASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV12-3A0A0B4J271 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV12-3A0A0B4J271 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV12-3A0A0B4J271 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV12-3A0A0B4J271 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV12-3A0A0B4J271 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV12-3A0A0B4J271 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.58□□□□□ -0.07
TRAV12-3A0A0B4J271 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV12-3A0A0B4J271 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.58□□□□□ -0.07
TRAV12-3A0A0B4J271 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 MIR663A-201ENST00000385250 93 ntBASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 AF201337.1-201ENST00000520239 748 ntBASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 AP001271.2-201ENST00000624018 1556 ntBASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAV12-3A0A0B4J271 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms