Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 DGCR10-201ENST00000609839 495 ntBASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 AC073314.1-201ENST00000568729 2216 ntBASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV19A0A0A6YYK7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 HLA-A-209ENST00000638375 975 ntBASIC20.33■□□□□ 0.85
TRAV19A0A0A6YYK7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV19A0A0A6YYK7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV19A0A0A6YYK7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TRAV19A0A0A6YYK7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TRAV19A0A0A6YYK7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.33■□□□□ 0.84
TRAV19A0A0A6YYK7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV19A0A0A6YYK7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV19A0A0A6YYK7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 AL137060.1-201ENST00000618151 2648 ntBASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 AC011506.1-201ENST00000474329 610 ntBASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 AC010331.1-201ENST00000611423 582 ntBASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 AC005363.2-201ENST00000618631 242 ntBASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 KRT8P8-201ENST00000434750 1448 ntBASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV19A0A0A6YYK7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 CYP2D8P-201ENST00000433633 1490 ntBASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 AC010947.1-201ENST00000623454 693 ntBASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV19A0A0A6YYK7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 AP005212.1-201ENST00000581547 1997 ntBASIC20.3■□□□□ 0.84
TRAV19A0A0A6YYK7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms