Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV30A0A087WSZ9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 LSM12P1-201ENST00000411836 588 ntBASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 AL355472.2-201ENST00000422958 438 ntBASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 AL162430.1-201ENST00000480705 870 ntBASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 AC005181.1-201ENST00000604782 1256 ntBASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 TREX1-205ENST00000625293 1783 ntBASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV30A0A087WSZ9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV30A0A087WSZ9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 AC133552.2-202ENST00000575694 574 ntBASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 AC116562.4-201ENST00000641316 2276 ntBASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV30A0A087WSZ9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms