Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC008385.1-201ENST00000604421 355 ntBASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 PART1_3.1-201ENST00000619680 131 ntBASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 LINC01616-201ENST00000561816 2280 ntBASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC9.89□□□□□ -0.83
TRIM35Q9UPQ4 DDX50P1-201ENST00000438163 2400 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 PSMC1P7-201ENST00000495689 1315 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 CD46-209ENST00000367047 3089 ntTSL 5 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC025040.2-201ENST00000558657 1852 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 SLC2A3P2-201ENST00000331747 1480 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 RBMX2P2-201ENST00000257020 946 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 Y_RNA.28-201ENST00000362554 111 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 RNU6-1322P-201ENST00000364309 107 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC117470.1-201ENST00000381974 330 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 NHP2P2-201ENST00000396362 460 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC113608.1-201ENST00000398740 305 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AL162578.1-201ENST00000406202 378 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 RNU2-8P-201ENST00000410727 190 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC109780.2-201ENST00000413467 845 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 RBMY2JP-201ENST00000425544 1059 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 NQO1-204ENST00000439109 924 ntTSL 2 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC010240.2-201ENST00000445363 1205 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 TAAR3P-201ENST00000466706 1078 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 TAAR3P-202ENST00000481759 1025 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AP005202.1-201ENST00000489915 867 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 RN7SL37P-201ENST00000490461 307 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC007375.1-201ENST00000554513 578 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC090826.1-203ENST00000569235 490 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC108451.2-201ENST00000603875 538 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC018695.5-201ENST00000605872 315 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC006335.3-201ENST00000613408 292 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC004696.1-201ENST00000614345 607 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC068234.2-201ENST00000619646 522 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC051619.3-201ENST00000560646 2426 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC069222.1-201ENST00000608028 3360 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 FARSBP1-201ENST00000435808 1778 ntBASIC9.88□□□□□ -0.83
TRIM35Q9UPQ4 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC009108.3-201ENST00000602739 3515 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 Y_RNA.231-201ENST00000364358 102 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 RN7SKP1-201ENST00000365525 307 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 SNORD3H-201ENST00000384486 214 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AL359704.1-201ENST00000411586 781 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 MTND4LP17-201ENST00000414607 293 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC127537.1-201ENST00000418183 748 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 FAM96AP1-201ENST00000430879 482 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 PGBD4P3-201ENST00000440731 581 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 HMGB1P16-201ENST00000447155 540 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 YWHAEP1-201ENST00000453697 763 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 AC004692.1-201ENST00000455430 424 ntBASIC9.87□□□□□ -0.83
TRIM35Q9UPQ4 MTCO3P10-201ENST00000455912 772 ntBASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms