Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.4□□□□□ -1.07
RIMBP3Q9UFD9 AP000769.2-201ENST00000602344 396 ntBASIC8.4□□□□□ -1.07
RIMBP3Q9UFD9 ZYXP1-201ENST00000617638 118 ntBASIC8.4□□□□□ -1.07
RIMBP3Q9UFD9 AL121890.3-201ENST00000618494 516 ntBASIC8.4□□□□□ -1.07
RIMBP3Q9UFD9 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.4□□□□□ -1.07
RIMBP3Q9UFD9 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 AL627171.1-201ENST00000618845 1308 ntBASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 AL590240.1-201ENST00000334118 313 ntBASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 CASKP1-201ENST00000412870 582 ntBASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 BX510359.2-201ENST00000417920 305 ntBASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 VN1R34P-201ENST00000447387 883 ntBASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 Z95152.1-201ENST00000453556 656 ntBASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 MORF4L1P3-201ENST00000525966 950 ntBASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 PMS2P3-207ENST00000529061 717 ntBASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 AP001880.2-201ENST00000538233 448 ntBASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RIMBP3Q9UFD9 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 ATP5F1P3-201ENST00000397213 657 ntBASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 RN7SL542P-201ENST00000467147 294 ntBASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 RN7SL165P-201ENST00000477476 291 ntBASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 DHFRP1-201ENST00000579682 559 ntBASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.38□□□□□ -1.07
RIMBP3Q9UFD9 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 RNA5SP326-201ENST00000363209 110 ntBASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 NANOGP9-201ENST00000439890 892 ntBASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 AC024220.1-201ENST00000603675 484 ntBASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 AC007529.1-201ENST00000418574 2178 ntBASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RIMBP3Q9UFD9 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AC011504.1-201ENST00000623331 4103 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 RN7SKP280-201ENST00000364196 304 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 Y_RNA.333-201ENST00000365274 102 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 MIR298-201ENST00000401212 88 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 ST13P16-201ENST00000401760 781 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AL731534.1-201ENST00000434711 269 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AC093827.1-201ENST00000480094 861 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 MTCO1P49-201ENST00000523429 802 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AP005119.2-201ENST00000579735 1105 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 RN7SL356P-201ENST00000582228 248 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AC005191.1-201ENST00000603950 358 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 USP9YP3-201ENST00000434481 1766 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms